Transcript Information: R_Transcript_58080.p2


Annotated TAIR IDAT3G07590.1
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2423146-2423958 | Forward length=114
E-Value1.3E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 184.059688607257
Replicate 290.615612322971
Replicate 3103.08031918269
Condition 2: 8 Hour
Replicate 163.631030619486
Replicate 281.058196674298
Replicate 385.62305799222
Condition 3: 24 Hour
Replicate 193.03953455438
Replicate 2101.13497004429
Replicate 397.198688576682


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58080.p2 GENE.R_Transcript_58080~~R_Transcript_58080.p2 ORF type:5prime_partial len:152 (+),score=20.28,LSM|PF01423.18|1.5e-17 R_Transcript_58080:1-456(+)
CGCTCAGCTATTTTACTTATTTTCGCTTTCTCGCTACTCTTCAGGCTCAAAAGCCCTAAACACCACAACCACCAGCACAGTTCCCCTCACCCTCTCATCGCAACGAAAATGAAGCTCGTACGGTTTTTGATGAAATTGAACAACGAGACTGTCTCCATTGAGCTCAAGAATGGCACTGTTGTTCACGGAACTATTACAGGTGTTGATATTAGCATGAACACACACTTGAAGACAGTCAAACTCACACCAAAAGGAAAAAATCCTGTAACTATGGATCACTTGAGCGTGCGTGGGAACAATATTCGATACTACATTCTTCCTGACAGCTTGAATCTTGAAACCTTGCTTGTGGAGGAGACACCGAGGGTCAAACCAAAGAAGGCAGCTGCTGGAAGACCTGCTGTGGGACGTGGAAGAGGTCGGGGCCGTGGGCGTGGACGTGCTCGTGGTCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58080.p2 GENE.R_Transcript_58080~~R_Transcript_58080.p2 ORF type:5prime_partial len:152 (+),score=20.28,LSM|PF01423.18|1.5e-17 R_Transcript_58080:1-456(+)
RSAILLIFAFSLLFRLKSPKHHNHQHSSPHPLIATKMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTPKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKAAAGRPAVGRGRGRGRGRGRARGR*

Click here to download the sequence:
Link to NCBI Protein BLAST