Transcript Information: R_Transcript_58178.p1


Annotated TAIR IDAT5G63630.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25472598-25476402 | Reverse length=788
E-Value4.8E-302
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.519240817906
Replicate 216.164664449096
Replicate 318.216864078159
Condition 2: 8 Hour
Replicate 118.809784578764
Replicate 219.863727523896
Replicate 323.157892398937
Condition 3: 24 Hour
Replicate 129.134273131604
Replicate 227.130580733417
Replicate 328.516975649596


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58178.p1 GENE.R_Transcript_58178~~R_Transcript_58178.p1 ORF type:5prime_partial len:591 (+),score=128.73,DEAD|PF00270.25|1.4e-43,Helicase_C|PF00271.27|2.7e+03,Helicase_C|PF00271.27|4.6e+03,Helicase_C|PF00271.27|1.5e-23,ResIII|PF04851.11|7.7e-08 R_Transcript_58178:3-1775(+)
AATGGGCGGGGCCCGAGTGGTGGGGTAGGGGAGAGAGAGTTTAGGGTGAGGAATGAGCGGGGGCGAGGTGGTGTTGGTGGTGGGAGAGGGAGAGTTGAGAGGAATGGTAGGAGGGGGAGACGAGCCACGTTTATGTCGGAGGATGAGGATGAAAGGTATGTCTTGAGGAAGGAGAAAGAGAAGTCGTATTCGGATTTTGTTGATTTGATTGATGGTGATGAGGATAGTGAAGACGAGACGAGTGATGAGGATGTGGAAGAGGAGATTAGGAGTAAGAGTAGGAGTTCTTTGTTTCCTAGTGAGGTTAAGAAACAGGGTTTTGTTAAATCAGAAGATGGAGGTGATGATAATTATCTTAGCCAAACAAGGTTCGATCAATGTCCTGTATCACCCCTATCTTTGAAAGCAATTAAAGATGTTGGCTATGAGAAGATGACTGTGGTACAAGAAGCCACTTTACCTGTTATACTAAAAGGTAAGGATGTTATGGCTAAGGCAAAAACCGGCACAGGAAAAACTGTGGCATTTTTGCTTCCATCCATTGAAGTTGTGATAAAATCACCTCCTGCTGGTCGTGATGAGAAGCGACCACCAATTCTTGTGCTTGTAATATGCCCAACACGAGAGCTTGCAAGTCAAGCTGCTGCGGAAGCTAACTCGTTGCTCAAGTATCATTCAACAATTGGTGTCCAAGTTGTGATGGGAGGTACTAGACTTGCAGTTGAGCAGAAGCGTATGCAGGCAAACCCTTGTCAGATTCTTGTAGCTACACCAGGTCGGCTCAGGGATCATCTTGAGAATACTGCAGGATTTGCAACTCGGCTTATGGGAGTGAACGTCCTTGTACTGGATGAAGCTGATCATTTGTTAGACATGGGATTTCGCAAAGACATTGAGAGGATCATTGCTGCAGTTCCCAAACAGCGACAGACGTTGCTGTTTTCTGCCACCATACCAGAGGAGGTCCGACAAATTTGCCATATTGCTTTAAAGAGAGACCATGAGTTTATCAACACAGTTCCAGAAGGTAGTGGAGAGACACACACACAGGTGAGGCAAATGCATTTAGTCGCTCCCTTGGAGAACCAATTCTCACTGTTATATGCCTTGCTAAAGGAGCATATTTCGGATGATGTGAACTATAAGGTTCTTGTATTCTGTACCACAGCGATGGTCACTAGGCTTGTAGCCGATCTGCTTGGTGAGCTGAACTTGAATGTCCGTGAGATCCACTCTAGAAAGCCACAGAGCTACAGGACCAGAGTTTCTGATGAGTTCCGCAAGTCAAAGGGTCTTATTCTGGTGACTTCTGATGTCTCAGCGCGTGGAGTTGACTATCCAGATGTTACCCTTGTAATACAGATGGGATTGCCTTCAGATAGAGAACAGTACATACATCGGCTTGGCAGAACGGGACGCAAAGGGAAAGAAGGGCAAGGGATACTCTTACTAGCACCATGGGAGGAATTCTTTTTGAATTCTGTTAAGGATCTCCCAATTACGAAAGCACCAATGCCGATGGTTGATCCTGATACGAGGAAGAAAGTGGAACGGGCGTTATCCCATGTGGAAATGAAAAATAAGGAAGCTGCATACCAGGCATGGCTCGGTTATTACAATTCAAATAAAACCGTGGGCAGGGACAAGTACAGACTTGTAGAGCTCGCAAATGAGTTTAGCCAAAGCATGGGACTGGACAACCCACCAGCAATCCCGAAGCTCGTCCTCGGCAAGATGGGTCTGAAGAATGTCCCTGGTTTGCGTTCCAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58178.p1 GENE.R_Transcript_58178~~R_Transcript_58178.p1 ORF type:5prime_partial len:591 (+),score=128.73,DEAD|PF00270.25|1.4e-43,Helicase_C|PF00271.27|2.7e+03,Helicase_C|PF00271.27|4.6e+03,Helicase_C|PF00271.27|1.5e-23,ResIII|PF04851.11|7.7e-08 R_Transcript_58178:3-1775(+)
NGRGPSGGVGEREFRVRNERGRGGVGGGRGRVERNGRRGRRATFMSEDEDERYVLRKEKEKSYSDFVDLIDGDEDSEDETSDEDVEEEIRSKSRSSLFPSEVKKQGFVKSEDGGDDNYLSQTRFDQCPVSPLSLKAIKDVGYEKMTVVQEATLPVILKGKDVMAKAKTGTGKTVAFLLPSIEVVIKSPPAGRDEKRPPILVLVICPTRELASQAAAEANSLLKYHSTIGVQVVMGGTRLAVEQKRMQANPCQILVATPGRLRDHLENTAGFATRLMGVNVLVLDEADHLLDMGFRKDIERIIAAVPKQRQTLLFSATIPEEVRQICHIALKRDHEFINTVPEGSGETHTQVRQMHLVAPLENQFSLLYALLKEHISDDVNYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQMGLPSDREQYIHRLGRTGRKGKEGQGILLLAPWEEFFLNSVKDLPITKAPMPMVDPDTRKKVERALSHVEMKNKEAAYQAWLGYYNSNKTVGRDKYRLVELANEFSQSMGLDNPPAIPKLVLGKMGLKNVPGLRSK*

Click here to download the sequence:
Link to NCBI Protein BLAST