Transcript Information: R_Transcript_58180.p1


Annotated TAIR IDAT5G63630.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25472598-25476402 | Reverse length=788
E-Value3.1E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8885822777145
Replicate 20.17035537863122
Replicate 30.41817573704944
Condition 2: 8 Hour
Replicate 10.14900120657553
Replicate 20.68035137447826
Replicate 30.36818682799974
Condition 3: 24 Hour
Replicate 10.83821608539285
Replicate 20.35789466759557
Replicate 30.71035147056868


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58180.p1 GENE.R_Transcript_58180~~R_Transcript_58180.p1 ORF type:5prime_partial len:493 (+),score=111.78,DEAD|PF00270.25|9.8e-44,Helicase_C|PF00271.27|1.2e+03,Helicase_C|PF00271.27|3.3e+03,Helicase_C|PF00271.27|6.3e-14,ResIII|PF04851.11|5.4e-08 R_Transcript_58180:3-1481(+)
AATGGGCGGGGCCCGAGTGGTGGGGTAGGGGAGAGAGAGTTTAGGGTGAGGAATGAGCGGGGGCGAGGTGGTGTTGGTGGTGGGAGAGGGAGAGTTGAGAGGAATGGTAGGAGGGGGAGACGAGCCACGTTTATGTCGGAGGATGAGGATGAAAGGTATGTCTTGAGGAAGGAGAAAGAGAAGTCGTATTCGGATTTTGTTGATTTGATTGATGGTGATGAGGATAGTGAAGACGAGACGAGTGATGAGGATGTGGAAGAGGAGATTAGGAGTAAGAGTAGGAGTTCTTTGTTTCCTAGTGAGGTTAAGAAACAGGGTTTTGTTAAATCAGAAGATGGAGGTGATGATAATTATCTTAGCCAAACAAGGTTCGATCAATGTCCTGTATCACCCCTATCTTTGAAAGCAATTAAAGATGTTGGCTATGAGAAGATGACTGTGGTACAAGAAGCCACTTTACCTGTTATACTAAAAGGTAAGGATGTTATGGCTAAGGCAAAAACCGGCACAGGAAAAACTGTGGCATTTTTGCTTCCATCCATTGAAGTTGTGATAAAATCACCTCCTGCTGGTCGTGATGAGAAGCGACCACCAATTCTTGTGCTTGTAATATGCCCAACACGAGAGCTTGCAAGTCAAGCTGCTGCGGAAGCTAACTCGTTGCTCAAGTATCATTCAACAATTGGTGTCCAAGTTGTGATGGGAGGTACTAGACTTGCAGTTGAGCAGAAGCGTATGCAGGCAAACCCTTGTCAGATTCTTGTAGCTACACCAGGTCGGCTCAGGGATCATCTTGAGAATACTGCAGGATTTGCAACTCGGCTTATGGGAGTGAACGTCCTTGTACTGGATGAAGCTGATCATTTGTTAGACATGGGATTTCGCAAAGACATTGAGAGGATCATTGCTGCAGTTCCCAAACAGCGACAGACGTTGCTGTTTTCTGCCACCATACCAGAGGAGGTCCGACAAATTTGCCATATTGCTTTAAAGAGAGACCATGAGTTTATCAACACAGTTCCAGAAGGTAGTGGAGAGACACACACACAGGTGAGGCAAATGCATTTAGTCGCTCCCTTGGAGAACCAATTCTCACTGTTATATGCCTTGCTAAAGGAGCATATTTCGGATGATGTGAACTATAAGGTTCTTGTATTCTGTACCACAGCGATGGTCACTAGGCTTGTAGCCGATCTGCTTGGTGAGCTGAACTTGAATGTCCGTGAGATCCACTCTAGAAAGCCACAGAGCTACAGGACCAGAGTTTCTGATGAGTTCCGCAAGTCAAAGGGTCTTATTCTGGTGACTTCTGATGTCTCAGCGCGTGGAGTTGACTATCCAGATGTTACCCTTGTAATACAGGTAATGTCCCTGCTGATTCTGCATGCTAGACATAACCCCCCCCCCTTCTGTTTGATGGGGTTGGATCAATTGCAGAACAGACTACGATTTGGGGGGAAAAGCTGGTTATCTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58180.p1 GENE.R_Transcript_58180~~R_Transcript_58180.p1 ORF type:5prime_partial len:493 (+),score=111.78,DEAD|PF00270.25|9.8e-44,Helicase_C|PF00271.27|1.2e+03,Helicase_C|PF00271.27|3.3e+03,Helicase_C|PF00271.27|6.3e-14,ResIII|PF04851.11|5.4e-08 R_Transcript_58180:3-1481(+)
NGRGPSGGVGEREFRVRNERGRGGVGGGRGRVERNGRRGRRATFMSEDEDERYVLRKEKEKSYSDFVDLIDGDEDSEDETSDEDVEEEIRSKSRSSLFPSEVKKQGFVKSEDGGDDNYLSQTRFDQCPVSPLSLKAIKDVGYEKMTVVQEATLPVILKGKDVMAKAKTGTGKTVAFLLPSIEVVIKSPPAGRDEKRPPILVLVICPTRELASQAAAEANSLLKYHSTIGVQVVMGGTRLAVEQKRMQANPCQILVATPGRLRDHLENTAGFATRLMGVNVLVLDEADHLLDMGFRKDIERIIAAVPKQRQTLLFSATIPEEVRQICHIALKRDHEFINTVPEGSGETHTQVRQMHLVAPLENQFSLLYALLKEHISDDVNYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVMSLLILHARHNPPPFCLMGLDQLQNRLRFGGKSWLSI*

Click here to download the sequence:
Link to NCBI Protein BLAST