Transcript Information: R_Transcript_58216.p1


Annotated TAIR IDAT1G54520.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20363565-20365874 | Forward length=391
E-Value5.3E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2729814133788
Replicate 25.0456225806608
Replicate 35.8006725695683
Condition 2: 8 Hour
Replicate 14.1126129756355
Replicate 25.72022558728
Replicate 35.3938894608385
Condition 3: 24 Hour
Replicate 16.1102174275285
Replicate 25.1861203076034
Replicate 35.4860655158373


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58216.p1 GENE.R_Transcript_58216~~R_Transcript_58216.p1 ORF type:complete len:387 (+),score=68.98,DUF1517|PF07466.7|4.3e-95 R_Transcript_58216:197-1357(+)
ATGGCAGACACATTACTCTTTGAATCTCAATCCACCCCTCTTCTACGCCCTTACCCAGTTCGTTTAACCTCTCTAACACAATTCACCAAACCCTCAATAACTCTCAAACCAAACAAGCCCTTAAAATTTACCCTGAACTGCATAGCCTCCAAAACTCAAAATTCTGCAAATCCCAATCTGGGTATGAAAGAAAAGGACCCAAACTCACTTGGGTTTCTCTTAAATTCAGTTTCCAAGGCCTTAAATGCTCTAAAGAAGCCAGCTTTAACCGCCATTTTAGTGGGGTTATTACTCATGTATGACCCGAACACGGCATGGGCCGGGTCGGGTGGGCGGATGGGTGGCCGGAACTTTTCGCGGAGACCGTCAATGTCAAGTTCTCAGGGTTATTCAGTTAGACCAGGTGGTATGGGTAGGGGTTTGTCTTATTCAGTGCCATTTTATGCACCTTCACCATTTAGTGGTGGTGGGTTCTTTATTGGGCCGGCTTATGGGTTTGGAGCAGTGTCCAATTTGGTGTGGATCATGATGGGTTTGGCTGCTTTTGGTGTGGTTTCTGGGTTGATCATGGATAAGCCTCAAGATGGGGTCTTGACTGCTACTGACAAAACTAGTGTCATTAAACTTCAGGTTGGACTATTGGGCATGGCACGGTCACTTCAAAGTGATCTCAATCGGATTGCTGAAAGTGCTGATGCATCTACCCCAGAGGGTCTAAGCTATGTCTTGACAGAAACAATACTGGCTTTGCTTCGCCACCCTGATTACTGCATCTCAGCTTATGCATCGGTTGATATTAAAAGGGGCATTGAGGATGGAGAGAAGAAGTTCAACCAACTATCTATTGAGGAACGAGGGAAATTTGATGAAGAAACATTGGTCAATGTGAACAACATAAAGAGACAGAGCACAAGAAGCACGAGAGCCACTGGATTCAGCAACGAGTATATAGTGATTACCATCTTGGTCGCTGCTGAAGGAGTACACAAATTGCCTGCTATGAATGGAAGCCTGGACTTGAAAGAAGCGTTACAGAAGCTTGCGTCTATCCCTTCGAGTAAAACCATGGCTGTTGAGGTGCTTTGGACTCCTCAGAATGAAAATGATACATTATCAGAGAGAGAGCTACTTGAAGACTACCCCCTTTTGAAGCCTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58216.p1 GENE.R_Transcript_58216~~R_Transcript_58216.p1 ORF type:complete len:387 (+),score=68.98,DUF1517|PF07466.7|4.3e-95 R_Transcript_58216:197-1357(+)
MADTLLFESQSTPLLRPYPVRLTSLTQFTKPSITLKPNKPLKFTLNCIASKTQNSANPNLGMKEKDPNSLGFLLNSVSKALNALKKPALTAILVGLLLMYDPNTAWAGSGGRMGGRNFSRRPSMSSSQGYSVRPGGMGRGLSYSVPFYAPSPFSGGGFFIGPAYGFGAVSNLVWIMMGLAAFGVVSGLIMDKPQDGVLTATDKTSVIKLQVGLLGMARSLQSDLNRIAESADASTPEGLSYVLTETILALLRHPDYCISAYASVDIKRGIEDGEKKFNQLSIEERGKFDEETLVNVNNIKRQSTRSTRATGFSNEYIVITILVAAEGVHKLPAMNGSLDLKEALQKLASIPSSKTMAVEVLWTPQNENDTLSERELLEDYPLLKPL*

Click here to download the sequence:
Link to NCBI Protein BLAST