Transcript Information: R_Transcript_58217.p1


Annotated TAIR IDAT1G54520.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20363565-20365874 | Forward length=391
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6068725239863
Replicate 22.1373479465693
Replicate 32.7433218678027
Condition 2: 8 Hour
Replicate 12.639195024254
Replicate 22.2762574329351
Replicate 32.2825378624439
Condition 3: 24 Hour
Replicate 12.6119660917747
Replicate 21.8489438590903
Replicate 31.9659614988231


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58217.p1 GENE.R_Transcript_58217~~R_Transcript_58217.p1 ORF type:internal len:167 (+),score=2.92 R_Transcript_58217:3-500(+)
CCACCACACCTCCACTCCCTACCACATTACTGTATTTCCCCCGCCACCATTTCAATTTTTCTGGTTCCTAAAAATTCCCCATTTCTTTATTTCTTTCTACCCAAACAAACACACAAACTAGAAAAAAACCCTCAAAAGATCCTCACTAAAAGGGGAAAAATCGCACTTCCAAAAATCCAATCAAACTCAAAAATGGCAGACACATTACTCTTTGAATCTCAATCCACCCCTCTTCTACGCCCTTACCCAGTTCGTTTAACCTCTCTAACACAATTCACCAAACCCTCAATAACTCTCAAACCAAACAAGCCCTTAAAATTTACCCTGAACTGCATAGCCTCCAAAACTCAAAATTCTGCAAATCCCAATCTGGGTATGAAAGAAAAGGACCCAAACTCACTTGGGTTTCTCTTAAATTCAGTTTCCAAGGCCTTAAATGCTCTAAAGAAGCCAGCTTTAACCGCCATTTTAGTGGGGTTATTACTCATGTATGACCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58217.p1 GENE.R_Transcript_58217~~R_Transcript_58217.p1 ORF type:internal len:167 (+),score=2.92 R_Transcript_58217:3-500(+)
PPHLHSLPHYCISPATISIFLVPKNSPFLYFFLPKQTHKLEKNPQKILTKRGKIALPKIQSNSKMADTLLFESQSTPLLRPYPVRLTSLTQFTKPSITLKPNKPLKFTLNCIASKTQNSANPNLGMKEKDPNSLGFLLNSVSKALNALKKPALTAILVGLLLMYDP

Click here to download the sequence:
Link to NCBI Protein BLAST