Transcript Information: R_Transcript_58218.p1


Annotated TAIR IDAT1G54520.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20363565-20365874 | Forward length=391
E-Value8E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1042450603263
Replicate 21.2140717927791
Replicate 31.7920236894949
Condition 2: 8 Hour
Replicate 12.2487018829103
Replicate 21.9774929519416
Replicate 32.5930872314839
Condition 3: 24 Hour
Replicate 12.7330722890124
Replicate 21.4253398602754
Replicate 32.084543303514


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58218.p1 GENE.R_Transcript_58218~~R_Transcript_58218.p1 ORF type:complete len:294 (+),score=44.51,DUF1517|PF07466.7|5.5e-44 R_Transcript_58218:197-1078(+)
ATGGCAGACACATTACTCTTTGAATCTCAATCCACCCCTCTTCTACGCCCTTACCCAGTTCGTTTAACCTCTCTAACACAATTCACCAAACCCTCAATAACTCTCAAACCAAACAAGCCCTTAAAATTTACCCTGAACTGCATAGCCTCCAAAACTCAAAATTCTGCAAATCCCAATCTGGGTATGAAAGAAAAGGACCCAAACTCACTTGGGTTTCTCTTAAATTCAGTTTCCAAGGCCTTAAATGCTCTAAAGAAGCCAGCTTTAACCGCCATTTTAGTGGGGTTATTACTCATGTATGACCCGAATACGGCATGGGCCGGGTCGGCTGGGCGGATGGGTGGGCGGAACTTTTCGCGGAGACCGTCAATGTCAAGTTCTCAGGGTTATTCAGTTAGACCAGGTGGTATGGGTAGGGGTTTGTCTTATTCAGTGCCATTTTATGCACCTTCACCATTTAGTGGTGGGTTCTTTATTGGGCCGGCTTATGGGTTTGGAGCAGTGTCCAATTTGGTGTGGATCATGATGGGTTTGGCTGCTTTTGGTGTGGTTTCTGGGTTGATCATGGATAAGCCTCAAGATGGGGTCTTGACTGCTACTGACAAAACTAGTGTCATTAAACTTCAGGTTGGACTATTGGGCATGGCACGGTCACTTCAAAGTGATCTCAATCGGATTGCTGAAAGTGCTGATGCATCTACCCCAGAGGGTCTAAGCTATGTCTTGACAGAAACAATACTGGCTTTGCTTCGCCACCCTGATTACTGCATCTCAGCTTATGCATCGGTTGATATTAAAAGGGGCATTGAGGATGGAGAGAAGAAGTTCAACCATCTATTGAGGAACGAGGGAAATTTGATGAAGAAACATTGGTCAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58218.p1 GENE.R_Transcript_58218~~R_Transcript_58218.p1 ORF type:complete len:294 (+),score=44.51,DUF1517|PF07466.7|5.5e-44 R_Transcript_58218:197-1078(+)
MADTLLFESQSTPLLRPYPVRLTSLTQFTKPSITLKPNKPLKFTLNCIASKTQNSANPNLGMKEKDPNSLGFLLNSVSKALNALKKPALTAILVGLLLMYDPNTAWAGSAGRMGGRNFSRRPSMSSSQGYSVRPGGMGRGLSYSVPFYAPSPFSGGFFIGPAYGFGAVSNLVWIMMGLAAFGVVSGLIMDKPQDGVLTATDKTSVIKLQVGLLGMARSLQSDLNRIAESADASTPEGLSYVLTETILALLRHPDYCISAYASVDIKRGIEDGEKKFNHLLRNEGNLMKKHWSM*

Click here to download the sequence:
Link to NCBI Protein BLAST