Transcript Information: R_Transcript_58230.p1


Annotated TAIR IDAT5G27860.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9875068-9876442 | Reverse length=177
E-Value3E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2817663383186
Replicate 26.2542171452803
Replicate 38.0417270284365
Condition 2: 8 Hour
Replicate 19.1170773739743
Replicate 27.6122150948717
Replicate 37.7240896256966
Condition 3: 24 Hour
Replicate 17.0827277617385
Replicate 27.3908580324807
Replicate 36.0540459772269


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58230.p1 GENE.R_Transcript_58230~~R_Transcript_58230.p1 ORF type:complete len:188 (+),score=36.73 R_Transcript_58230:90-653(+)
ATGGCGGCTTCCACGTCGACGGGCACGTCTTCATCGGACACGTCATCAACGACGTCGTCTTCATCGTCTCACAAACACCGCCACCGTCGCCGCCGTAGTAGTAGTCGCCACCGTGAGGCTCTCAAGATCCGGAAAAACAAATCTCATTCCAAGTCCAAACGACGTCGTCGTCATCATCGTTCTTCCTCTGATTCTCTCTCTTCTTCCTCTTACTCCTCCTCCGACGATTACAGTAGCTCTTCTGACAGTGAGTGTGAAACATCTAGTCATTCAAGGAGACGCAAGAATGATAGCAAGCCAAAGAAGATCAAAACAAAAGACAGAGAGAAGAGCCAACGCCATAAACATCACAAGCACAAAAAAGAGAAAGATCGGGATAGGAGAAGAAGTAGCAGTCCTGTGCAGCTTTCGAAGTTCTTAGGCCGAGACAAAGAAGATGATGTCCGTCGAAGTGTGGTGTCTGGTAAAAAGATTCAAATGAAGCTTGAGAAGTCGAAGGAGGACAAGCTGGCAGAGAACAAGCGTAACGAATTGCTGAAGTTTCTGAATGCCAGTTATGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58230.p1 GENE.R_Transcript_58230~~R_Transcript_58230.p1 ORF type:complete len:188 (+),score=36.73 R_Transcript_58230:90-653(+)
MAASTSTGTSSSDTSSTTSSSSSHKHRHRRRRSSSRHREALKIRKNKSHSKSKRRRRHHRSSSDSLSSSSYSSSDDYSSSSDSECETSSHSRRRKNDSKPKKIKTKDREKSQRHKHHKHKKEKDRDRRRSSSPVQLSKFLGRDKEDDVRRSVVSGKKIQMKLEKSKEDKLAENKRNELLKFLNASYD*

Click here to download the sequence:
Link to NCBI Protein BLAST