Transcript Information: R_Transcript_58248.p1


Annotated TAIR IDAT2G46280.1
Annotated Gene NameTGF-beta receptor interacting protein 1
Annotated Gene Symbol(s)TRIP-1, TIF3I1
Annotation TypeOrtholog
Chromosome Positionchr2:19003656-19005393 | Reverse length=328
E-Value1.7E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.936592589337
Replicate 246.687753438251
Replicate 342.475307401911
Condition 2: 8 Hour
Replicate 135.129218303711
Replicate 238.766352940749
Replicate 345.059777117946
Condition 3: 24 Hour
Replicate 147.588419504663
Replicate 252.034894719226
Replicate 349.329826894842


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58248.p1 GENE.R_Transcript_58248~~R_Transcript_58248.p1 ORF type:5prime_partial len:398 (+),score=83.99,WD40|PF00400.28|16,WD40|PF00400.28|1.3e-06,WD40|PF00400.28|0.87,WD40|PF00400.28|8.3e-05,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.00052 R_Transcript_58248:2-1195(+)
TCGAACTTACTTATTCTCAGCTTTTCTCAGACCGCCCCCAAACTCTACTACCCTTCCAGAAAAATAAACCCTCCTTCTTCCTCAGTTCCCTCTCTCCTCTCTTTTTTGCCGCCGACGTCATCATCTTCTGATTTTCTCTCTCATCACCACCAATTTCTTGTTATTCTTCATAGTAGAGAAAGAAGAAGAAGAACAACAAAAAAAGCAAAGATGAGGCCAATATTGATGAAAGGCCATGAAAGGCCATTGACATTCTTGAAGTTCAACAGAGATGGAGATTTGTTATTCTCCTGTGCTAAGGACCACACTCCAACTGTGTGGTTCGCTGATAATGGAGAGCGTCTCGGCACTTACAAGGGTCACAACGGAGCAGTCTGGACTTGCTCCTGCTCCTGGGATTCTTCTCGCCTTCTCACTGGTAGTGCAGATCAGACAGCAAAGTTGTGGGATGTTCAAACTGGAAAATCATTGTACACATTTGTTTTTGACTCTCCTGCTAGGTCTGTGGACTTCTCTGTTGGTGATAAGCTTGCTGTTGTAACCACTGATCCATTCATGGAAAAGACGTCTGCCATCCATGTGAAGCGCATTGCAGATGATGTTGACGAACAAACTGAAGAATCTGTTCTCGTCATGAGGGGCCCAAGTGGCCGAATTAATAGAGCTGTGTGGGGGCCTTTGAACAAGTTTATTATCAGTGCTGGCGAGGATGCTATCATTCGTATGTGGGATCCTGTGACAGGCCAAGAGATAATGTCAACAAGAGAACATGAAAATAGACACAAGAAAACAATTACATCACTGTGCCTATCTGCAGACGGGTCACATTTTCTCACAGGTTCACTAGATAAATCAGCTAAGCTGTGGGATACCAGAACTTTGACCCTTATAAAGACATACAATACAGAGCGGCCGGTCAATGCTGTTACCATGTCTCCTCTTCTTGACCATGTTGTGCTTGGAGGTGGTCAAGATGCTTCAGCTGTGACAACTACAGATCATCGTGCAGGAAAATTTGAAGCCAAATTTTATGACAAGATTCTCCAGGAAGAAATTGGTGGTGTGAAAGGTCACTTTGGGCCTATAAATGCCCTGGCATTCAATCCTGATGGCAAAAGTTTTGCCAGTGGGGGTGAAGATGGTTATGTGAGGCTGCACCATTTCGACCCTGATTATTTCAATATCAAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58248.p1 GENE.R_Transcript_58248~~R_Transcript_58248.p1 ORF type:5prime_partial len:398 (+),score=83.99,WD40|PF00400.28|16,WD40|PF00400.28|1.3e-06,WD40|PF00400.28|0.87,WD40|PF00400.28|8.3e-05,WD40|PF00400.28|1.6e+04,WD40|PF00400.28|0.00052 R_Transcript_58248:2-1195(+)
SNLLILSFSQTAPKLYYPSRKINPPSSSVPSLLSFLPPTSSSSDFLSHHHQFLVILHSRERRRRTTKKAKMRPILMKGHERPLTFLKFNRDGDLLFSCAKDHTPTVWFADNGERLGTYKGHNGAVWTCSCSWDSSRLLTGSADQTAKLWDVQTGKSLYTFVFDSPARSVDFSVGDKLAVVTTDPFMEKTSAIHVKRIADDVDEQTEESVLVMRGPSGRINRAVWGPLNKFIISAGEDAIIRMWDPVTGQEIMSTREHENRHKKTITSLCLSADGSHFLTGSLDKSAKLWDTRTLTLIKTYNTERPVNAVTMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFASGGEDGYVRLHHFDPDYFNIKI*

Click here to download the sequence:
Link to NCBI Protein BLAST