Transcript Information: R_Transcript_58270.p2


Annotated TAIR IDAT5G65260.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26080501-26082984 | Reverse length=220
E-Value9.6E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.615520607548
Replicate 218.29223142329
Replicate 313.709335379515
Condition 2: 8 Hour
Replicate 19.6459467973996
Replicate 210.502838440557
Replicate 310.31341512522
Condition 3: 24 Hour
Replicate 18.3482935373469
Replicate 29.690947088284
Replicate 37.9591653406899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58270.p2 GENE.R_Transcript_58270~~R_Transcript_58270.p2 ORF type:complete len:132 (+),score=19.67,RRM_1|PF00076.18|4.5e-13,RRM_6|PF14259.2|4.6e-09,RRM_5|PF13893.2|94,RRM_5|PF13893.2|9e-06 R_Transcript_58270:1066-1461(+)
ATGCTCAGATCAAAACCATTTGTGCAGGTTGATTATGCGTGCACCCCAGAAGAAGTCCAGCAACATTTTCAATCTTGTGGAACAGTGAATAGAGTGACCATTCTGACAGACAAGTTTGGCCAGCCAAAGGGTTTTGCCTATGTTGAATTTGTTGAGCAAGGAGCTGTTCAACAGGCTCTCCTCTTGAATGAATCTGAATTACACGGGCGTCAATTGAAGGTTCTGCCAAAGAGGACAAACGTGCCAGGCATGAAACAATACAGGGCAAGGCGTTTCAATCCTTATATGCCATTTCGTTCCCGCAGGCCATATCCTCCCTCCTACTTCTATTCCCCATATGGCTATGGGAAGGCTCCTAGGTTGAGAAGGCCTACCCGTTATATGCCCTACTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58270.p2 GENE.R_Transcript_58270~~R_Transcript_58270.p2 ORF type:complete len:132 (+),score=19.67,RRM_1|PF00076.18|4.5e-13,RRM_6|PF14259.2|4.6e-09,RRM_5|PF13893.2|94,RRM_5|PF13893.2|9e-06 R_Transcript_58270:1066-1461(+)
MLRSKPFVQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEQGAVQQALLLNESELHGRQLKVLPKRTNVPGMKQYRARRFNPYMPFRSRRPYPPSYFYSPYGYGKAPRLRRPTRYMPYY*

Click here to download the sequence:
Link to NCBI Protein BLAST