Transcript Information: R_Transcript_58279.p1


Annotated TAIR IDAT2G35930.1
Annotated Gene Nameplant U-box 23
Annotated Gene Symbol(s)PUB23
Annotation TypeHomolog
Chromosome Positionchr2:15083101-15084336 | Reverse length=411
E-Value9E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9279475997801
Replicate 26.033983530852
Replicate 35.7266843990381
Condition 2: 8 Hour
Replicate 16.7507758499414
Replicate 27.5232873484363
Replicate 38.1003682908736
Condition 3: 24 Hour
Replicate 15.4712531243594
Replicate 26.647496254403
Replicate 36.0856001349084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58279.p1 GENE.R_Transcript_58279~~R_Transcript_58279.p1 ORF type:complete len:428 (+),score=69.45,U-box|PF04564.11|2.4e-13,U-box|PF04564.11|65,U-box|PF04564.11|2.3e+02 R_Transcript_58279:162-1445(+)
ATGGAAGATCAGATTGAAATCCCATCACATTTTCTGTGCCCAATCTCTCTTCAGTTGATGAGAGATCCAGTTACCATCTCAACAGGGATTACATACGACAGGGAGAGCATTGAGAAATGGCTATTCACCTGCAAGAACACCACGTGTCCTGTTACAAAGCAAGTGATCATCAGGAGCTCCTCATCACAAGATGATGATGATCTTGATGGTGGTGACGTCATGATGATCACACCCAACCACACTCTCCGCCGTCTGATCCAGTCCTGGTGTGTCCTCCATGCATCCGAGGGTGTGGAGCGCATTCCCACTCCAAAGCAGCCCCACACCGTAGATCGCGCCCACATCAGGAAGCTTCTTTCTGATGCCAAGAGATCACCAGCGCTACGCTACTCCTGCTTGCAGAATATCCGGTCTCTCATGCGTGAGGCTAGAACAGTCAGGAAAGTTCTATTGGATTCTGGAGCCTTCAGGTATGTTGCTTCCATCCTAGCAGAACAAGACTGCCACGAGGTGGCCCCCGAGAGGAGAGAGAAAGAAGAAGCTTTGCTAATTCTAGCGCAGATTGACGGCCCTGAGGACGAGCTCAGGGCGGCCATTAGAAAGAGTGATTGTTGCTTATTGTTTGATTCGCTTGTCGAGTTCTTGAGATCTGGAGGATCCGAGATCCGAGAACAAGCTGTGAGGTTGTTGAAATTTGTTTACAACGTGGCGGATCCAAACCAGCTGTCAAATGCAAAGCATGAGCAGTTTTTCGAGATCACCAGACTTGTCCGAAATCGTGTCTCTCAACAAGCAACTAAATACGCCTTGAAGCTCTTGGTGGAGTTGAACCGGTGGGGGAGGAACCGGGTCAAGGCCGTGAAATCCGGGTCGGTTTCTGCCCTCGTAGAACTCCTCATGGACGGGTCGGATCGTCGGGCTAGTGAGCTGGCCTTGGTGGTGTTGGACCAGCTGTGTGGGTGTGCTGAAGGAAGGGCGGATCTAGTGGCGCATGGTGCAGGATTAGCAATTGTGTCCAAGAAGATCCTGAGGGTCTCACACGTGGCAAGTTATCGGGCCGTCAGGATCTTGTCATCGATCTCGAGGTACTCGGCCACCGGGAAGGTCTTAGGGGAGATGATGGAGGTTGGGGTGGTGGCAAAGTTGTGCTTGGTCATCCAAGTGGATTGTAATGCAAAGACTAAGGATAGGGCTAAGGAGATCTTGAGGTTGCATTCTAGGGTTTGGAAGATGTCCCCTTGCATCCCACCTCATTTGCTCTCCGCTTATCCACCAACTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58279.p1 GENE.R_Transcript_58279~~R_Transcript_58279.p1 ORF type:complete len:428 (+),score=69.45,U-box|PF04564.11|2.4e-13,U-box|PF04564.11|65,U-box|PF04564.11|2.3e+02 R_Transcript_58279:162-1445(+)
MEDQIEIPSHFLCPISLQLMRDPVTISTGITYDRESIEKWLFTCKNTTCPVTKQVIIRSSSSQDDDDLDGGDVMMITPNHTLRRLIQSWCVLHASEGVERIPTPKQPHTVDRAHIRKLLSDAKRSPALRYSCLQNIRSLMREARTVRKVLLDSGAFRYVASILAEQDCHEVAPERREKEEALLILAQIDGPEDELRAAIRKSDCCLLFDSLVEFLRSGGSEIREQAVRLLKFVYNVADPNQLSNAKHEQFFEITRLVRNRVSQQATKYALKLLVELNRWGRNRVKAVKSGSVSALVELLMDGSDRRASELALVVLDQLCGCAEGRADLVAHGAGLAIVSKKILRVSHVASYRAVRILSSISRYSATGKVLGEMMEVGVVAKLCLVIQVDCNAKTKDRAKEILRLHSRVWKMSPCIPPHLLSAYPPTN*

Click here to download the sequence:
Link to NCBI Protein BLAST