Transcript Information: R_Transcript_58308.p1


Annotated TAIR IDAT1G63430.2
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23522896-23526451 | Forward length=688
E-Value4.4e-311
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.146850075328
Replicate 210.404971360148
Replicate 313.689825427286
Condition 2: 8 Hour
Replicate 111.264946743481
Replicate 214.157481402407
Replicate 316.513669425352
Condition 3: 24 Hour
Replicate 115.418408996121
Replicate 212.789440066725
Replicate 316.836695912998


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58308.p1 GENE.R_Transcript_58308~~R_Transcript_58308.p1 ORF type:complete len:676 (+),score=117.84,Pkinase_Tyr|PF07714.13|2.5e-18,Pkinase|PF00069.21|1.1e-17,LRR_8|PF13855.2|3.6e-06,LRR_8|PF13855.2|0.0069,LRR_8|PF13855.2|3.4e+03,LRRNT_2|PF08263.8|1e-07,LRR_1|PF00560.29|4.1e+03,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|2.2e+02,LRR_1|PF00560.29|43,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|3.8e+03,LRR_4|PF12799.3|0.0017,LRR_4|PF12799.3|1 R_Transcript_58308:159-2186(+)
ATGGGAAAACTGACTTGGGTTTTGCTTCAATTTGCTATTTTTGGAGCATTTACTCTCACTTGTGACTCATTTGTGTCAAATGAAGTATGGGCACTGACAGCTTTTAAAGAAGCATTATATGAAGACCCATATTTGGTTTTGGCCAATTGGAATGGTTTAGATCCAACTCCTTGTGATTGGACTGGTGTTTCTTGTTCAATCACTATGGACCATGTTGTCAAACTGAACATTTCTGGGTTATCTATGAAGGGATTTCTTGCACCTGAATTGGGTCTACTGACTAAAATGGAGCAGCTTATCCTTCATGGTAATAATCTGATAGGGGCTATTCCTAAAGAAATTGGCTTGTTGAAGAACCTTAAGGTCTTGGATCTTGGAGCAAACCAGCTAACTGGACCGATTCCTCGAGAGCTGGGGAATTTAACTAACATGCTTAAACTGAATTTGCAGTCCAATGGATTGACTGGAATGCTACCTCCTGAGCTTAGCGAGTTGAAATATCTTCAGGAACTTTACCTGGATAGAAATAAGCTCCAAGGTATTGTGCCTGGTAGTGGCACAACAGATTATGCATCCAACTTTCATGGGATGTATGCATCCAACGGGAACAATGCAGGTTTTTGTCGCTCATCTCAATTAAAAGTTGCTGATTTTTCCTACAACTTCTTTGTTGGGAGTATTCCAAAATGCTTGCAATATCTTCCAAGGTCAAGCTTTCAAGGAAACTGCCTTCAGGACAAGGATCCAAAACAGCGTACTAGTGCTCAGTGTGGGGCTGCTCTACCTGCCAGAACTCATTTGAATAATACTACCAGCACAAAGCATAAGACTTCGGAGAATAGAGCCAAGCATCCAAAGGTGTCAAAACCTGCATGGCTTTTAGCTTTAGAAATAGTAACTGGAACTATGGTGGGTGCTCTCTTCTTTACTGCCATGTTTACTGCCTTCAAACGATGCAACAACAAATCATCAGTGATTATCCCTTGGAAGAAATCGGGAAGTGACAAGGATCGCTTGGGAGTTTATATAGATTCTGACATGCTGAAAGATATTCCAAGATTCAATAGACAAGAACTTGAAGTAGCATGTGAAGACTTTAGTAACATAATCGGAACTTCCTCTGATAGTATGGTTTACAAAGGCACTATGAAAGGTGGATCTGAGATTGCTGTGATATCCTTCTGCATCAAAGAAGATCAGTGGACTGGCTACCATGAGCTTTATTACCAGAGAGAGTTAGCAGATTTAGCAAGGTTAAATCATGAGAACACTGGGAAACTGCTGGGTTATTGTCGAGAGAGTTCTCCATTCACTAGAATACTAATTTTTGAATATGCATCCAACGGAACATTGTATGAGCATCTTCATTCTATGTTTGCAGATGGAGAAGGCTGCCAGCTGTCTTGGACACGACGTATGAAAATCATTATTGGCATTGCTCGTGGATTGAGATATCTTCATACAGAACTCAACCCTCCATTTACCATATCCGAGTTGAATTCTAGTGCTGTATATCTTACTGAGGATTTTTCACCCAAGCTAGTTGATTTTGAGAGCTGGAAGACGATTCTCGCAAGGTCAGAGAAGAATTCCTCTGCCATAGACAGCAATGGTGCTATATGCGTTCTACCGCGTTCCATTGAGGCGCGTCATCTGGATATCAAGGGCAACGTATATGCCTTTGGAATACTCCTACTGGAGATAGTCAGTGGCAAACCTCCCTTCTGCAAGGATACAGGAAGCTTGGTAGATTGGGCTAGGGAGTACCTTGAGGTGCCAGAGGCAATGCCCTATATTGTCGATTCACAATTGAAACATTTTGAATACGAGGACCTCAAGGCTGTTTGTGAAGCGGCAAGCCTTTGCCTGAACCTGGATCCTCTAAAGCGGCCCCCAATGCAGGAGATGTGCACTATGCTTGAGAGCCGCATCGATCTGTCCGTGTCAGCAGAGCTCAGGTCATCGTCTTTGGCGTGGGCGGAGCCTGGCCCTCTCAACATGATAGTTGAAAGTACTAATACACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58308.p1 GENE.R_Transcript_58308~~R_Transcript_58308.p1 ORF type:complete len:676 (+),score=117.84,Pkinase_Tyr|PF07714.13|2.5e-18,Pkinase|PF00069.21|1.1e-17,LRR_8|PF13855.2|3.6e-06,LRR_8|PF13855.2|0.0069,LRR_8|PF13855.2|3.4e+03,LRRNT_2|PF08263.8|1e-07,LRR_1|PF00560.29|4.1e+03,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|2.2e+02,LRR_1|PF00560.29|43,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|3.8e+03,LRR_4|PF12799.3|0.0017,LRR_4|PF12799.3|1 R_Transcript_58308:159-2186(+)
MGKLTWVLLQFAIFGAFTLTCDSFVSNEVWALTAFKEALYEDPYLVLANWNGLDPTPCDWTGVSCSITMDHVVKLNISGLSMKGFLAPELGLLTKMEQLILHGNNLIGAIPKEIGLLKNLKVLDLGANQLTGPIPRELGNLTNMLKLNLQSNGLTGMLPPELSELKYLQELYLDRNKLQGIVPGSGTTDYASNFHGMYASNGNNAGFCRSSQLKVADFSYNFFVGSIPKCLQYLPRSSFQGNCLQDKDPKQRTSAQCGAALPARTHLNNTTSTKHKTSENRAKHPKVSKPAWLLALEIVTGTMVGALFFTAMFTAFKRCNNKSSVIIPWKKSGSDKDRLGVYIDSDMLKDIPRFNRQELEVACEDFSNIIGTSSDSMVYKGTMKGGSEIAVISFCIKEDQWTGYHELYYQRELADLARLNHENTGKLLGYCRESSPFTRILIFEYASNGTLYEHLHSMFADGEGCQLSWTRRMKIIIGIARGLRYLHTELNPPFTISELNSSAVYLTEDFSPKLVDFESWKTILARSEKNSSAIDSNGAICVLPRSIEARHLDIKGNVYAFGILLLEIVSGKPPFCKDTGSLVDWAREYLEVPEAMPYIVDSQLKHFEYEDLKAVCEAASLCLNLDPLKRPPMQEMCTMLESRIDLSVSAELRSSSLAWAEPGPLNMIVESTNTL*

Click here to download the sequence:
Link to NCBI Protein BLAST