Transcript Information: R_Transcript_58447.p1


Annotated TAIR IDAT1G43700.1
Annotated Gene NameVIRE2-interacting protein 1
Annotated Gene Symbol(s)VIP1, SUE3
Annotation TypeOrtholog
Chromosome Positionchr1:16484352-16486017 | Forward length=341
E-Value3.7E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.185111888127
Replicate 227.476640050958
Replicate 327.035606348051
Condition 2: 8 Hour
Replicate 122.793015024967
Replicate 227.661239018355
Replicate 328.415113909445
Condition 3: 24 Hour
Replicate 132.25430200633
Replicate 225.540534369582
Replicate 326.049070763172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58447.p1 GENE.R_Transcript_58447~~R_Transcript_58447.p1 ORF type:5prime_partial len:405 (+),score=74.45,bZIP_2|PF07716.11|2.1e-07,bZIP_2|PF07716.11|23,bZIP_1|PF00170.17|9.5e+03,bZIP_1|PF00170.17|1.3e-06,bZIP_1|PF00170.17|8.3 R_Transcript_58447:3-1217(+)
TTCCTTCCTTTCTTCCCTTTCTTGACTAATTATTGCTGTCTCAACTTCCAACTTCCCTTCACCACTACAACCGCCGCAACCACTGCAACCCTAATGAACCCATCAAACTACTCGAAGCCCAATCCAAGCCCATTTCCACCGGGCCTACGAGGCCCAATCGAAGTGGACCCAACTCCCCAAAGACTACCAGGCCACCGGCGGGCCCACTCAGACACGACTTTCCGATTCTCCGGAGATGAAGACGAAGACTTCCTCTTTGACCTCGACAACTTCAATCTCTCCTCTCTCGACATGCCCCCTTGTGGTAGTCCCCACCAAGGGGCCCCACCTCTTCCTATGGCCGTTGATTCGTCCAAGTCAGACGAATCTAGTGGGGACAACAGGTCATCGTCCACTTCATCCCGGGCCCACCACCTTGGTTCTGGTGGTTCTGGTGGTGGTGGTGGGGGACATCATCATGTAAGGAGCTTGTCTGTGGATGCGGATTTCTTCGACGGGCTTTCGTCGTTCGGTGGCGGTGGTGGAGGAGAGAGAAAAGTGGAAGGAGCTGGGCATCGGAGGACGAGTTCCATGGATGGAGGGAGTTCGAGTTCGATGATGTTGTTTGAAGGCGGGGATTCGGTTATGGATGGTGTTAAGAAAGCTATGCCCCCTGAGAAACTCGCTGAGCTCGCTCTCATTGACCCTAAACGCGCTAAAAGAATTCTTGCAAACAGACAATCTGCAGCACGTTCAAAGGAAAGGAAAATAAGATACACTAATGAGTGGGAGAGGAAGGTACAGACGCTGCAGACAGAAGCGACCACCCTTTCGGCACAAGTCACGATGCTGCAGAGAGACACTACAGGGCTAACTGCTGAGAACAAGGAACTTAAGCTACGTCTGCAGGCACTGGAGCAGCAAGCACAACTTAGAGATGCTCTAAATGAAGCCTTGAGGCAAGAAGTTCAAAGGCTGAGGATAGCTACTGGGCAAAACAACAACTCTACCAGTAGAGGACTCTTTCCCCAGTTTCCGACACATTCTCAGTCCCAGAACATGCCTCTGTTTGGTGGCCAACCGAACCATCAGCAGCAGCCGCAACCACAGCAGTCACAACCACAGCCACAATCACAGCAGTTTCAAATACCGAGTCAGCCATCGGGTGGCAATCAGAACAATGTTCACAAGCAGCAGCTGAAACCGAGCTTCTTGGACTTCAATCATAGGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58447.p1 GENE.R_Transcript_58447~~R_Transcript_58447.p1 ORF type:5prime_partial len:405 (+),score=74.45,bZIP_2|PF07716.11|2.1e-07,bZIP_2|PF07716.11|23,bZIP_1|PF00170.17|9.5e+03,bZIP_1|PF00170.17|1.3e-06,bZIP_1|PF00170.17|8.3 R_Transcript_58447:3-1217(+)
FLPFFPFLTNYCCLNFQLPFTTTTAATTATLMNPSNYSKPNPSPFPPGLRGPIEVDPTPQRLPGHRRAHSDTTFRFSGDEDEDFLFDLDNFNLSSLDMPPCGSPHQGAPPLPMAVDSSKSDESSGDNRSSSTSSRAHHLGSGGSGGGGGGHHHVRSLSVDADFFDGLSSFGGGGGGERKVEGAGHRRTSSMDGGSSSSMMLFEGGDSVMDGVKKAMPPEKLAELALIDPKRAKRILANRQSAARSKERKIRYTNEWERKVQTLQTEATTLSAQVTMLQRDTTGLTAENKELKLRLQALEQQAQLRDALNEALRQEVQRLRIATGQNNNSTSRGLFPQFPTHSQSQNMPLFGGQPNHQQQPQPQQSQPQPQSQQFQIPSQPSGGNQNNVHKQQLKPSFLDFNHRV*

Click here to download the sequence:
Link to NCBI Protein BLAST