Transcript Information: R_Transcript_58456.p1


Annotated TAIR IDAT2G43945.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59870.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18197995-18199988 | Reverse length=289
E-Value6.8E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.350022993662
Replicate 29.5437729164991
Replicate 311.411720184265
Condition 2: 8 Hour
Replicate 16.8560421852287
Replicate 29.676163414913
Replicate 39.3068258089984
Condition 3: 24 Hour
Replicate 19.8509863740694
Replicate 28.1002950834484
Replicate 39.8693650224555


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58456.p1 GENE.R_Transcript_58456~~R_Transcript_58456.p1 ORF type:complete len:275 (+),score=62.69 R_Transcript_58456:319-1143(+)
ATGTCAACCACCACCACCACCTCATTGAGGCTGTTGTCTATCTCATCTTCTATACCTCCTCTTAAACCTTCTTCTTCTTCAAACCCTAATTGGACCATCTGCTCTACTTCATCATCATCTTCTTTTCAAAGGAAATGGGTCATGCCCAAAAGATCTTTCAGCACCAGGTGGATTGGTGCAAACATGAGGAATTCCCAGAATATGGACAAAGGACGGACAGGCATGGAAGATGTCACTGCCATGTCTGGTTCTGATGAAGAGTCTGGCACTAAAATTCCAACACAAGCTCAATCACTTGTTGAGGGATCAAGCTCTGTAATGGTGTCTGAGTTTCAGCCTGTCCGTGATGTTGATTACATACAGGAGTTATTGGCAATTCAGCAACAAGGGCCAAGATCAATTGGATTTTTCGGAACCAGGAATATGGGCTTCATGCATCAAGAGCTTATTGAGATACTTAGCTATGCTATGGTGATTACTAAAAATCACATATATACCTCTGGAGCCTCAGGGACTAATGCTGCAGTCATTAGAGGTGCTTTAAGAGCTGAGAAACCAGAACTTCTTACTGTGATTTTGCCTCAAAGTTTGAAAAAGCAACCTCCTGAAAGCCAGGAATTGTTAGCTAAGGTGAAGAATGTCATAGAGAAGCCTCATAATGATCATCTACCTTTGATAGAAGCAAGCAGGTTATGCAACATGGATATCATTTCGCAAGTACAGCAGGTGATTTGTTTTGCGTTTCATGACAGTAAACTACTCATGGAAACATGTCAAGAAGCAAAAAACCTCCGGAAGATTGTAACTCTTTTCTATCTTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58456.p1 GENE.R_Transcript_58456~~R_Transcript_58456.p1 ORF type:complete len:275 (+),score=62.69 R_Transcript_58456:319-1143(+)
MSTTTTTSLRLLSISSSIPPLKPSSSSNPNWTICSTSSSSSFQRKWVMPKRSFSTRWIGANMRNSQNMDKGRTGMEDVTAMSGSDEESGTKIPTQAQSLVEGSSSVMVSEFQPVRDVDYIQELLAIQQQGPRSIGFFGTRNMGFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLAKVKNVIEKPHNDHLPLIEASRLCNMDIISQVQQVICFAFHDSKLLMETCQEAKNLRKIVTLFYLD*

Click here to download the sequence:
Link to NCBI Protein BLAST