Transcript Information: R_Transcript_58457.p1


Annotated TAIR IDAT2G43945.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59870.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18197995-18199988 | Reverse length=289
E-Value5.6E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.396401384514
Replicate 20.45893552822509
Replicate 30.75104057692303
Condition 2: 8 Hour
Replicate 10.40140762208599
Replicate 22.3216216119264
Replicate 30.69432390351207
Condition 3: 24 Hour
Replicate 11.5054299821445
Replicate 20.48208216154267
Replicate 30.35881483093274


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58457.p1 GENE.R_Transcript_58457~~R_Transcript_58457.p1 ORF type:complete len:183 (+),score=45.48 R_Transcript_58457:2579-3127(+)
ATGAGGAATTCCCAGAATATGGACAAAGGACGGACAGGCATGGAAGATGTCACTGCCATGTCTGGTTCTGATGAAGAGTCTGGCACTAAAATTCCAACACAAGCTCAATCACTTGTTGAGGGATCAAGCTCTGTAATGGTGTCTGAGTTTCAGCCTGTCCGTGATGTTGATTACATACAGGAGTTATTGGCAATTCAGCAACAAGGGCCAAGATCAATTGGATTTTTCGGAACCAGGAATATGGGCTTCATGCATCAAGAGCTTATTGAGATACTTAGCTATGCTATGGTGATTACTAAAAATCACATATATACCTCTGGAGCCTCAGGGACTAATGCTGCAGTCATTAGAGGTGCTTTAAGAGCTGAGAAACCAGAACTTCTTACTGTGATTTTGCCTCAAAGTTTGAAAAAGCAACCTCCTGAAAGCCAGGAATTGTTAGCTAAGGTGAAGAATGTCATAGAGAAGCCTCATAATGATCATCTACCTTTGATAGAAGCAAGCAGGTATGAAGCGCTCAAAGATCTCTACTTTTCATGTTCTAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58457.p1 GENE.R_Transcript_58457~~R_Transcript_58457.p1 ORF type:complete len:183 (+),score=45.48 R_Transcript_58457:2579-3127(+)
MRNSQNMDKGRTGMEDVTAMSGSDEESGTKIPTQAQSLVEGSSSVMVSEFQPVRDVDYIQELLAIQQQGPRSIGFFGTRNMGFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLAKVKNVIEKPHNDHLPLIEASRYEALKDLYFSCSR*

Click here to download the sequence:
Link to NCBI Protein BLAST