Transcript Information: R_Transcript_58594.p1


Annotated TAIR IDAT3G06170.1
Annotated Gene NameSerinc-domain containing serine and sphingolipid biosynthesis protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1867520-1869738 | Forward length=409
E-Value3E-242
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.801775798822
Replicate 220.380272042226
Replicate 325.371032105274
Condition 2: 8 Hour
Replicate 123.348379778547
Replicate 227.281369287901
Replicate 333.640393276903
Condition 3: 24 Hour
Replicate 121.779044509411
Replicate 219.305092134051
Replicate 324.616978376461


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58594.p1 GENE.R_Transcript_58594~~R_Transcript_58594.p1 ORF type:complete len:409 (+),score=53.98,Serinc|PF03348.11|8.1e-110 R_Transcript_58594:195-1421(+)
ATGTCGTGCTTGGCATCATGCTGTGCATCCCTAGCGTGTGGATGTTGCACATCGGTGGCCTCAGGAATCACCAAGAAGTCTGCTCGAATTGCTTATTGTGGTCTCTTTGGTGCCTCTCTTATTCTTTCTTGGATTCTCCGAGAAGTTGCTGCTCCTTTGTTGCAGAAATTCCCATGGATAAATAATGCTTCTCACACAAAGGAATGGTACCAGACGAGTGCAGTCCTTCGGGTCAGCTTGGGAAATTCCCTGTTTTTTGCTGTGCTTGCCGTGATAATGATTGGAGTGAAAGACCAGAATGACCGACGTGATTCTTGGCATCATGGGGGATGGATGGTGAAGATGATTGTCTGGTTCCTACTTATTGTCCTAATGTTTTTTATGCCAAATGTTGTTGTTGACATATATGGGATTCTGTCAAAATTTGGCGCTGGGCTATTTTTGTTGGTTCAGGTTGTTATATTGCTGGAGTTCTCTTACATTTGGAATGATGCTTGGGTTGCAAAAGATGAGCAGAAATGGTACATAGCTTTGCTTGCAGTATCTGTTGGATGCTACATCGCAGCCTACACTATATCTGGAATTTTGTTTATTTGGTTTAATCCATCCGGTCAAGACTCTGGCCTTAGTGTGTTCTTCATTGTCATGACCATGATATTGGCATTTCTCTTCGCTGTAATTGCTTTGCATCCAAAGGTAAATGGGAGCCTCTTGCCTGCCTCAGTGATTTCTGTCTACTGTGCCTATGTATGTTATACTGGTCTTTCTAGCGAACCTCATGACTATGCTTGCAATGGCTTACATAACAAAAAAGCTGTCTCTGTAAGCACCCTTGTCCTCGGAATGCTCACTACAGTGCTCTCTGTCTTGTACTCAGCACTACGTGCTGGTTCCTCAACGACCTTTTTGTCGCCATCATCTCCAAGGGCAGGTGCAAGCACACCTCTACTAGATTCAGAAGATACGGAATCTGGCAAAGACAAAAAGGATTCAGAGTCTCGTCCTGTCAGTTACTCTTACACATTCTTTCATCTGATTTTTGCTCTGGCTAGCATGTACGCGGCCATGCTTCTCTCTGGATGGACCAGTTCTGGTGATAGCTCAGATCTGATTGATATCGGCTGGACATCGGTCTGGGTAAAGATCTGCACAGAGTGGGCAACTGCCGCACTTTATGTCTGGTCTCTTGTTGCCCCTCTGCTTATGCCAGATCGTGAGTTCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58594.p1 GENE.R_Transcript_58594~~R_Transcript_58594.p1 ORF type:complete len:409 (+),score=53.98,Serinc|PF03348.11|8.1e-110 R_Transcript_58594:195-1421(+)
MSCLASCCASLACGCCTSVASGITKKSARIAYCGLFGASLILSWILREVAAPLLQKFPWINNASHTKEWYQTSAVLRVSLGNSLFFAVLAVIMIGVKDQNDRRDSWHHGGWMVKMIVWFLLIVLMFFMPNVVVDIYGILSKFGAGLFLLVQVVILLEFSYIWNDAWVAKDEQKWYIALLAVSVGCYIAAYTISGILFIWFNPSGQDSGLSVFFIVMTMILAFLFAVIALHPKVNGSLLPASVISVYCAYVCYTGLSSEPHDYACNGLHNKKAVSVSTLVLGMLTTVLSVLYSALRAGSSTTFLSPSSPRAGASTPLLDSEDTESGKDKKDSESRPVSYSYTFFHLIFALASMYAAMLLSGWTSSGDSSDLIDIGWTSVWVKICTEWATAALYVWSLVAPLLMPDREFF*

Click here to download the sequence:
Link to NCBI Protein BLAST