Transcript Information: R_Transcript_58602.p1


Annotated TAIR IDAT1G49870.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 6518 Blast hits to 5022 proteins in 522 species: Archae - 49; Bacteria - 635; Metazoa - 3264; Fungi - 379; Plants - 242; Viruses - 9; Other Eukaryotes - 1940 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18460345-18463557 | Forward length=828
E-Value4.8E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0916389913052
Replicate 24.4315335667587
Replicate 34.86809852844
Condition 2: 8 Hour
Replicate 11.817727965516
Replicate 20.94390913157843
Replicate 31.9551953215555
Condition 3: 24 Hour
Replicate 16.2156508651426
Replicate 24.9439736086592
Replicate 35.7029099548102


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58602.p1 GENE.R_Transcript_58602~~R_Transcript_58602.p1 ORF type:complete len:687 (+),score=188.69 R_Transcript_58602:94-2154(+)
ATGGATCTAGGGTGCTTAGATTGTGGTCGCATTTCATTGTCAGAAGAAAAGAAAACTTCTATTGAATCACCAACTATTCAGTCTAGCAACTCTTCCTCTGGTTCTGGTTCTGTTTCTGGCAAGAATAAATCACCAAGGGGCAGCCCACCATCATCAGGATTGCATGCTCTAAATCGATTCACATGTCAAATTAAGAAGCCCCCTCATCGGAAAACTTCTCCGCCTCTTAATTGGTTTCCTCGGAAAAAGGTGGACTCCTACTTGAAGAGAAAAATAAAACTCCTGCAGGAAGCTGGAGGCATGAACGATACACTCGATGAGACATTGGGTCACACGAATCCTCACTATTGTCGAGTAGAAAGAGAGAAAATTGCTGCCAGAGAGGCAGCTTGCAAGGTAATGGAGGCTCGAAAAGCTGCTATGGTTGAAGCGTCCTGGTGCCGGATACTTCAAGCAGCCAGGATACCAAACAAAGAAGCAGATGCTCTCTTGTCGAAAGTAGAGAAAGAGGTAGCTGAGGCAATCGAAGCTGCAACTGCAAAAGGACTGATCATGTACGATGCACCTGATCGCCCTCGGAAACATTTCGAGATAGAAACATCCTCCGTTGGTGGAAAAGGATCCACCACTCATACAGTAAAGGCATCATTTGAGACAGCTTTTGAAGTGGATAAGCAAGTGGCTGCAGCTGTCAAGACTGCCTTCACCCGACTTGCACATTGTGGTTCGTTTAATAAAGATGAAATCAAGGATTTGTTGAGAAAAATCAGCGAAAACCCTGAAAATCAGGAGCTGTCAGGGCCTGAAGCTGGCTCAGAACTTGAAGCAGAACCTCGAGATGATGATAATGATGATGGGTTCAGTTCGCAAAAATTTAATGGGACGAAACTTGTGGACATGATGCTTGAAAGGCTTAAATGCCTGAAAGAAGAAGAGCTTGCTTCTCTAGCTACAATTGTTGCAACTTGTGGGCTGAATGCTGCTTTAGCTGATGGACAAGGCTGTAAAAGAATGCAGGATCAAATTTCTGCTACCAATGTGGAGCACTTGATGAGTGGAGCTATGAGGGCAAAGCAAGTTGAACAAGAGTTGCCTAGTTTGGACAAGTTTCTTGTCAAGAAAATGACCAAACTTGAGAAGGAAGTGCAAGAAGCTAGAATCGCTAGGAAGGCCCAGACCAGTACTACAGGTGGAGATGACAAACAAGTTTCTGTTGATCATGTATTAGACTTGGGAAGTGTGCTAGTAAAACATTCGTCAAAACTTGAGAAAGAGATCGAAGAAGAGAAAAAAACCCAGAAGTCATCGGAAATGGGTGGCCGTAAGCTAGGAGGAAGAATGCACAACCATGGCAAAAACAGACAAGTCAAACAAGAGGATTCAGAAGTTCCTAGTTTAGACCAGGTTTTGGTAAAACATGTGTCAAGACTCGAAAGGGAGGTCCAGGATGCCAAGAACAGGAGAAGAGAAACAGAGAAAGGAAACGTTGACTCGAACAATCATAGAAATGAAAGCACTGAACAGGAAGATAGTCTAGATAAGATTCTGGTGAAACCATTACACAGGCTGGAAAGGGAGAAAATACAGGCAATTTCACAAGGGAAGGAAGGTGGAGAATGGAACTACAGAAGAAAGCTAGGGAAAACAACAAATGATGTAGATGGTTGTGAGAGTTTGGATAAAGTATTGGTCAAGCATGTTTGTAGATTAGAGAAGGAGAAACTGAAAGTTGGTACAAATGACGTACTGGAAGTAAAGAAAAAGGGCAGTTCAGCACAATCAGATACTAGTGTTGGTGGCCTGGACCAAGTTCTTGTCAAACACAAGTCAAGGCTTGAGATAGAAAAGACTGTTGCTTCGCAAAAACCACCTGAAGACGATGGGAAGTCACATTCCATCATGTCTCGACGTGAAGCAAGGGAGAGAGAGTTGTTTGAAGCATGGGGAGGCATTGGCTTAGGTAATTCTATCCGACCACACGTCTCAAGATTGGAAAGAGACAAGGCTGCTTGGCTTAAAGCTGAAGAGGAAGAAAGAAGGATAGCTCTACAAGAACAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58602.p1 GENE.R_Transcript_58602~~R_Transcript_58602.p1 ORF type:complete len:687 (+),score=188.69 R_Transcript_58602:94-2154(+)
MDLGCLDCGRISLSEEKKTSIESPTIQSSNSSSGSGSVSGKNKSPRGSPPSSGLHALNRFTCQIKKPPHRKTSPPLNWFPRKKVDSYLKRKIKLLQEAGGMNDTLDETLGHTNPHYCRVEREKIAAREAACKVMEARKAAMVEASWCRILQAARIPNKEADALLSKVEKEVAEAIEAATAKGLIMYDAPDRPRKHFEIETSSVGGKGSTTHTVKASFETAFEVDKQVAAAVKTAFTRLAHCGSFNKDEIKDLLRKISENPENQELSGPEAGSELEAEPRDDDNDDGFSSQKFNGTKLVDMMLERLKCLKEEELASLATIVATCGLNAALADGQGCKRMQDQISATNVEHLMSGAMRAKQVEQELPSLDKFLVKKMTKLEKEVQEARIARKAQTSTTGGDDKQVSVDHVLDLGSVLVKHSSKLEKEIEEEKKTQKSSEMGGRKLGGRMHNHGKNRQVKQEDSEVPSLDQVLVKHVSRLEREVQDAKNRRRETEKGNVDSNNHRNESTEQEDSLDKILVKPLHRLEREKIQAISQGKEGGEWNYRRKLGKTTNDVDGCESLDKVLVKHVCRLEKEKLKVGTNDVLEVKKKGSSAQSDTSVGGLDQVLVKHKSRLEIEKTVASQKPPEDDGKSHSIMSRREARERELFEAWGGIGLGNSIRPHVSRLERDKAAWLKAEEEERRIALQEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST