Transcript Information: R_Transcript_58607.p1


Annotated TAIR IDAT3G20250.1
Annotated Gene Namepumilio 5
Annotated Gene Symbol(s)APUM5, PUM5
Annotation TypeOrtholog
Chromosome Positionchr3:7059098-7062660 | Reverse length=961
E-Value3.1E-204
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.526152606959
Replicate 215.192445016671
Replicate 321.952290196313
Condition 2: 8 Hour
Replicate 117.169966273983
Replicate 224.451533395443
Replicate 328.168200627369
Condition 3: 24 Hour
Replicate 121.301298779364
Replicate 217.101791192592
Replicate 324.579180568111


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58607.p1 GENE.R_Transcript_58607~~R_Transcript_58607.p1 ORF type:complete len:984 (+),score=212.55,PUF|PF00806.15|6.3e-06,PUF|PF00806.15|8.6e-08,PUF|PF00806.15|0.0006,PUF|PF00806.15|3.1e-06,PUF|PF00806.15|1.8e-05,PUF|PF00806.15|7.1e-07,PUF|PF00806.15|7e-06,PUF|PF00806.15|1.8e-09 R_Transcript_58607:172-3123(+)
ATGGCAACTGAGAGTCCTATTAGAATGCTTGAGGCACGGGGAAAGTGGGCCCCACACAAGGGGGCTGCAACTTTCTCTTCACCTGCTAATATGGCTGTGGATGAGGAGGCGTTACTTGTTAAGGGTCACAAGTACCGCGGTGGGAGGGGTCTTGTTCCCAATCGAAGCGGAAGTGCACCCCCGAACATGGAAGGCTCTCTTGCAGCCATAGGAAATCTCATGCAGAACTCCACTCTAAATGCAAATTTGGCAAGTCTACATTATCATGGAGAATTCGGAGGGCCTGAAGGGCAATTGGTTTCTTATTCATCTTCTGTATCAGATTACTCTTCCAATACCGGGTTCAGTCCCCAGTTCCATCACTCTTTCACCCCAGGATTTGATCAAGATTTAGTATCTAATCATGTTGGCAACCAGTTGAGGTTTACTTCTCTTAGTGGGAGCAGTGATAATTTCTTGCATTTGTCTCGAAGTTCTCTTCCAACACACAAGGAGGAGCCTGAGGATGATAGATCGCCACAGAAGTCTTCTGATGATTTGACAGACAGGAGTTCTGCTGTGTGGTCTGCACAGGAATCATCTACATCTATTGGACAATCTAGAAATACTACGAATCTCATAAAGGATGATCCTACGTGTATGTCGTCACCTGCAAATGATCAGCTAAACACCTTATGCCAAGGATCTGGGGTTGACGGGCGTAGCAGTCACGATAATGATAATACTTCCGTTCATGAGGAGTCAACCAGTGTATCAACAATAGAAGCATTGGTTGTCCGTGTGACTAATACTACATCGCCTTCAAGCTTTGATCATTCCGCTGTTTTGAGATCTGTATCTAATGAATCAAGACAAGGTTCGTCGCTGCCCATTCAAAACGCTGATTCAAGCAGTATAGGTTTACGTCCAGGAAACAAGACTTTGGTTAGTGGTGATCCAGACATTGCTAGCGTGCAATCTGGAATCAAGGCTTTAAAATTAGCCTCCCCGCCGAATTCAGAGAAACATGGAGGTCGAGGAGAAAGACAACCCAACTTCCAAACTAATCTTCTGCACCACCAAATGCACCAACAGGGTGGTAACTTCCAGTTTCAGGGTTCCATGCCTCAAATAGTATCTCAGGGTACAAATAATTCATATGTTGTTGCTAATCAATTTTTTCATGGTGGAAAGTTCTCTTCAACAGAAGTTCAACCAGTACTTCACTCTTCAGGTTTTACACCTCCGCTTTATGCTACTGCAGCAGCCAATTATTTGCACTCAGCAAGTCCATATTATGCAGGAGTACAACCACCTGGAGTAGTATATTCTCCACAGTATGGTGTGGGTGGATACCCTTTCAATGCCAGCGTTCTTCCTCCTTTCTTGCCTGGATACCCTCCACATAATGCTGTCCCTTTAGCTTTTGATGGCGTTACTGCTGCTGGTTCTGATGTTAATACTCAAGTTTCTGGGTCATGGGGAAGCAGTCCTCAAGGAGTTGATCTGCAGCATATGAATAAATTCTATGGACAACTTGGATATGCACAACCCTTTGTTGATCCTCGCCTGCAATTTCACCAGCCTTTTGGAGATTTGTACAATGTTCCTGGTCATGTTGATCCTTTGGCGTTGAGAGGAGGTGCTGTTGGGAACCAGGGAGCTGGTGGACAGAGCAATGCAAGTCAGAGAAGGGGGGCAATTCCTGGTACAGATAATGCTGGAAGCTCAGCGAACATGGGCTTCTTCATGCATATTCCGAACTCGTCTCTTGCAAGTCCAGTGTTGCCTGGATCTCCCATTGGCGGGGGCAGTCTTCCTGGAGGAAGAAGTGATGTGAGTTCACCAAATTCTGGTAGACGTGCAAGTATATATGCTGGTTGGCAAGGTCAACGAGAATTTGAAAACTTTAGTTATCAAAAGCCTTACTCCTTCCTTGAGGAGCTAAAGGCTGGTAAAGGCAGAAGATTTGAGCTATCTGATATAGCAGGTCATGTGGTTGAATTCAGTGTTGATCAACATGGGAGTCGATTTATTCAGCAGAAGCTGGAAAATTGTAGCGCTAAAGACAAGGCATCTGTGTTTCAAGAAGTTCTTCCTCATGCATCCAAATTGATGACTGATGTATTTGGAAATTATGTTATTCAAAAGTTTTTTGAGTATGGAACCTCTGACCAGAGGAGGGACCTAGCCAATGCACTCTCAGGTCAGATCTTACCGCTGAGCCTGCAGATGTATGGTTGTAGAGTCATCCAAAAGGCACTTGATGTTATTGAGCTTGACCATAAGGCTGAGCTTGTTCATGAGCTGGATGGACATGTCATGAGATGTGTTCGTGATCAAAACGGGAATCATGTGATTCAGAAGTGTATTGAATGTGTTCCAACAGAAAAGATTAGTTTTATTATTTCCGCTTTCCGTGGACAAGTTGCTAGCCTTTCCATGCATCCTTATGGTTGTCGTGTTATACAGCGAGTTTTGGAGCACTGTACTGATGCATTGCAAACCCAGTTTATAGTGGATGAAATATTGGATTCTGTTTGTACCCTTGCTCAAGACCAGTATGGCAACTATGTTACCCAGCATGTATTGGAGAGGGGGAAGCCTCAGGAGAGGACCCAAATCATTAAAAATTTGTGTGGGCAAGTTGTACAAATGAGCCAGCATAAGTTTGCATCAAATGTTGTTGAAAAGTGTCTGGAGTATGGTGAGCCTGCTGCAAGAGAACTCTTGATTGCTGAAGTCATTGGGCAAAGCGAGGAAAACGATAACTTATTGGTAATGATGAAAGATCAATATGCTAATTATGTGGTCCAAAAGATTCTTGAGACATGTACAGATAGTCAACGAGATCTGCTGATTGGTCGAATAAAAGTGCATCTTCATGCTTTGAAGAAATATACTTATGGAAAGCATATTGTGGCCCGCTTTGAGCAGTTATTTGGAGAAATTCAAGCACAGGGATCTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58607.p1 GENE.R_Transcript_58607~~R_Transcript_58607.p1 ORF type:complete len:984 (+),score=212.55,PUF|PF00806.15|6.3e-06,PUF|PF00806.15|8.6e-08,PUF|PF00806.15|0.0006,PUF|PF00806.15|3.1e-06,PUF|PF00806.15|1.8e-05,PUF|PF00806.15|7.1e-07,PUF|PF00806.15|7e-06,PUF|PF00806.15|1.8e-09 R_Transcript_58607:172-3123(+)
MATESPIRMLEARGKWAPHKGAATFSSPANMAVDEEALLVKGHKYRGGRGLVPNRSGSAPPNMEGSLAAIGNLMQNSTLNANLASLHYHGEFGGPEGQLVSYSSSVSDYSSNTGFSPQFHHSFTPGFDQDLVSNHVGNQLRFTSLSGSSDNFLHLSRSSLPTHKEEPEDDRSPQKSSDDLTDRSSAVWSAQESSTSIGQSRNTTNLIKDDPTCMSSPANDQLNTLCQGSGVDGRSSHDNDNTSVHEESTSVSTIEALVVRVTNTTSPSSFDHSAVLRSVSNESRQGSSLPIQNADSSSIGLRPGNKTLVSGDPDIASVQSGIKALKLASPPNSEKHGGRGERQPNFQTNLLHHQMHQQGGNFQFQGSMPQIVSQGTNNSYVVANQFFHGGKFSSTEVQPVLHSSGFTPPLYATAAANYLHSASPYYAGVQPPGVVYSPQYGVGGYPFNASVLPPFLPGYPPHNAVPLAFDGVTAAGSDVNTQVSGSWGSSPQGVDLQHMNKFYGQLGYAQPFVDPRLQFHQPFGDLYNVPGHVDPLALRGGAVGNQGAGGQSNASQRRGAIPGTDNAGSSANMGFFMHIPNSSLASPVLPGSPIGGGSLPGGRSDVSSPNSGRRASIYAGWQGQREFENFSYQKPYSFLEELKAGKGRRFELSDIAGHVVEFSVDQHGSRFIQQKLENCSAKDKASVFQEVLPHASKLMTDVFGNYVIQKFFEYGTSDQRRDLANALSGQILPLSLQMYGCRVIQKALDVIELDHKAELVHELDGHVMRCVRDQNGNHVIQKCIECVPTEKISFIISAFRGQVASLSMHPYGCRVIQRVLEHCTDALQTQFIVDEILDSVCTLAQDQYGNYVTQHVLERGKPQERTQIIKNLCGQVVQMSQHKFASNVVEKCLEYGEPAARELLIAEVIGQSEENDNLLVMMKDQYANYVVQKILETCTDSQRDLLIGRIKVHLHALKKYTYGKHIVARFEQLFGEIQAQGSG*

Click here to download the sequence:
Link to NCBI Protein BLAST