Transcript Information: R_Transcript_58609.p1


Annotated TAIR IDAT4G25880.1
Annotated Gene Namepumilio 6
Annotated Gene Symbol(s)APUM6, PUM6
Annotation TypeHomolog
Chromosome Positionchr4:13155518-13159078 | Forward length=861
E-Value5E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.667281714105
Replicate 214.872379461545
Replicate 317.770901587491
Condition 2: 8 Hour
Replicate 117.392737403004
Replicate 221.162977456836
Replicate 325.930872314838
Condition 3: 24 Hour
Replicate 122.320090360268
Replicate 214.309662018291
Replicate 321.366568861019


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58609.p1 GENE.R_Transcript_58609~~R_Transcript_58609.p1 ORF type:complete len:1008 (+),score=215.35,PUF|PF00806.15|6.4e-06,PUF|PF00806.15|8.8e-08,PUF|PF00806.15|0.00061,PUF|PF00806.15|3.1e-06,PUF|PF00806.15|1.8e-05,PUF|PF00806.15|7.4e-07,PUF|PF00806.15|7.2e-06,PUF|PF00806.15|1.9e-09 R_Transcript_58609:172-3195(+)
ATGGCAACTGAGAGTCCTATTAGAATGCTTGAGGCACGGGGAAAGTGGGCCCCACACAAGGGGGCTGCAACTTTCTCTTCACCTGCTAATATGGCTGTGGATGAGGAGGCGTTACTTGTTAAGGGTCACAAGTACCGCGGTGGGAGGGGTCTTGTTCCCAATCGAAGCGGAAGTGCACCCCCGAACATGGAAGGCTCTCTTGCAGCCATAGGAAATCTCATGCAGAACTCCACTCTAAATGCAAATTTGGCAAGTCTACATTATCATGGAGAATTCGGAGGGCCTGAAGGGCAATTGGTTTCTTATTCATCTTCTGTATCAGATTACTCTTCCAATACCGGGTTCAGTCCCCAGTTCCATCACTCTTTCACCCCAGGATTTGATCAAGATTTAGTATCTAATCATGTTGGCAACCAGTTGAGGTTTACTTCTCTTAGTGGGAGCAGTGATAATTTCTTGCATTTGTCTCGAAGTTCTCTTCCAACACACAAGGAGGAGCCTGAGGATGATAGATCGCCACAGAAGTCTTCTGATGATTTGACAGACAGGAGTTCTGCTGTGTGGTCTGCACAGGAATCATCTACATCTATTGGACAATCTAGAAATACTACGAATCTCATAAAGGATGATCCTACGTGTATGTCGTCACCTGCAAATGATCAGCTAAACACCTTATGCCAAGGATCTGGGGTTGACGGGCGTAGCAGTCACGATAATGATAATACTTCCGTTCATGAGGAGTCAACCAGTGTATCAACAATAGAAGCATTGGTTGTCCGTGTGACTAATACTACATCGCCTTCAAGCTTTGATCATTCCGCTGTTTTGAGATCTGTATCTAATGAATCAAGACAAGGTTCGTCGCTGCCCATTCAAAACGCTGATTCAAGCAGTATAGGTTTACGTCCAGGAAACAAGACTTTGGTTAGTGGTGATCCAGACATTGCTAGCGTGCAATCTGGAATCAAGGCTTTAAAATTAGCCTCCCCGCCGAATTCAGAGAAACATGGAGGTCGAGGAGAAAGACAACCCAACTTCCAAACTAATCTTCTGCACCACCAAATGCACCAACAGGGTGGTAACTTCCAGTTTCAGGGTTCCATGCCTCAAATAGTATCTCAGGGTACAAATAATTCATATGTTGTTGCTAATCAATTTTTTCATGGTGGAAAGTTCTCTTCAACAGAAGTTCAACCAGTACTTCACTCTTCAGGTTTTACACCTCCGCTTTATGCTACTGCAGCAGCCAATTATTTGCACTCAGCAAGTCCATATTATGCAGGAGTACAACCACCTGGAGTAGTATATTCTCCACAGTATGGTGTGGGTGGATACCCTTTCAATGCCAGCGTTCTTCCTCCTTTCTTGCCTGGATACCCTCCACATAATGCTGTCCCTTTAGCTTTTGATGGCGTTACTGCTGCTGGTTCTGATGTTAATACTCAAGTTTCTGGGTCATGGGGAAGCAGTCCTCAAGGAGTTGATCTGCAGCATATGAATAAATTCTATGGACAACTTGGATATGCACAACCCTTTGTTGATCCTCGCCTGCAATTTCACCAGCCTTTTGGAGATTTGTACAATGTTCCTGGTCATGTTGATCCTTTGGCGTTGAGAGGAGGTGTTGTTGGGAACCAGGTGAGTAATTTTGATTCACAGGTAGGGCCTGAGTTATCATCTATTGCTCCTGATCACAGACATCAACATCAGGGAGCTGGTGGACAGAGCAATGCTAGTCAGAGAAGGGGGCCAATTCCTGGTACAGATTATGCTGGAAGCTCAGCGAACATGGGCTTCTTCATGCATATTCCGAACTCGTCTCTTGCAAGTCCAGTGTTGCCTGGATCTCCCATTGGCGGGGGCAGTCTTCCTGGAGGAAGAAGTGATGTGAGTTCACCAAATTCTGGTAGACGTGCAAGTATATATGCTGGTTGGCAAGGTCAACGAGAATTTGAAAACTTTAGTTATCAAAAGCCTTACTCCTTCCTTGAGGAGCTAAAGGCTGGTAAAGGCAGAAGATTTGAGCTATCTGATATAGCAGGTCATGTGGTTGAATTCAGTGTTGATCAACATGGGAGTCGATTTATTCAGCAGAAGCTGGAAAATTGTAGCGCTAAAGACAAGGCATCTGTGTTTCAAGAAGTTCTTCCTCATGCATCCAAATTGATGACTGATGTATTTGGAAATTATGTTATTCAAAAGTTTTTTGAGTATGGAACCTCTGACCAGAGGAGGGACCTAGCCAATGCACTCTCAGGTCAGATCTTACCGCTGAGCCTGCAGATGTATGGTTGTAGAGTCATCCAAAAGGCACTTGATGTTATTGAGCTTGACCATAAGGCTGAGCTTGTTCATGAGCTGGATGGACATGTCATGAGATGTGTTCGTGATCAAAACGGGAATCATGTGATTCAGAAGTGTATTGAATGTGTTCCAACAGAAAAGATTAGTTTTATTATTTCCGCTTTCCGTGGACAAGTTGCTAGCCTTTCCATGCATCCTTATGGTTGTCGTGTTATACAGAGAGTTTTGGAGCATTGTACTGATGCATTGCAGACCCAGTTTATAGTGGATGAAATATTGGATTCTGTTTGTACCCTTGCTCAAGACCAGTATGGCAACTATGTTACCCAGCATGTATTGGAGAGGGGAAAGCCTCAGGAAAGGACCCAAATCATAAAAAATTTGTGTGGGCAAGTTGTACAAATGAGCCAGCATAAGTTTGCATCAAATGTTGTTGAAAAGTGTCTGGAGTATGGTGAGCCTGCTGCAAGAGAACTCTTGATTGCTGAAGTCATTGGGCAAAGCGAGGAAAACGATAACTTATTGGTAATGATGAAAGATCAATATGCTAATTATGTGGTCCAAAAGATTCTTGAGACATGTACAGATAGTCAACGAGATCTGCTGATTGGTCGAATAAAAGTGCATCTTCATGCTTTGAAGAAATATACTTATGGAAAGCATATTGTGGCCCGCTTTGAGCAGTTATTTGGAGAAATTCAAGCACAGGGATCTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58609.p1 GENE.R_Transcript_58609~~R_Transcript_58609.p1 ORF type:complete len:1008 (+),score=215.35,PUF|PF00806.15|6.4e-06,PUF|PF00806.15|8.8e-08,PUF|PF00806.15|0.00061,PUF|PF00806.15|3.1e-06,PUF|PF00806.15|1.8e-05,PUF|PF00806.15|7.4e-07,PUF|PF00806.15|7.2e-06,PUF|PF00806.15|1.9e-09 R_Transcript_58609:172-3195(+)
MATESPIRMLEARGKWAPHKGAATFSSPANMAVDEEALLVKGHKYRGGRGLVPNRSGSAPPNMEGSLAAIGNLMQNSTLNANLASLHYHGEFGGPEGQLVSYSSSVSDYSSNTGFSPQFHHSFTPGFDQDLVSNHVGNQLRFTSLSGSSDNFLHLSRSSLPTHKEEPEDDRSPQKSSDDLTDRSSAVWSAQESSTSIGQSRNTTNLIKDDPTCMSSPANDQLNTLCQGSGVDGRSSHDNDNTSVHEESTSVSTIEALVVRVTNTTSPSSFDHSAVLRSVSNESRQGSSLPIQNADSSSIGLRPGNKTLVSGDPDIASVQSGIKALKLASPPNSEKHGGRGERQPNFQTNLLHHQMHQQGGNFQFQGSMPQIVSQGTNNSYVVANQFFHGGKFSSTEVQPVLHSSGFTPPLYATAAANYLHSASPYYAGVQPPGVVYSPQYGVGGYPFNASVLPPFLPGYPPHNAVPLAFDGVTAAGSDVNTQVSGSWGSSPQGVDLQHMNKFYGQLGYAQPFVDPRLQFHQPFGDLYNVPGHVDPLALRGGVVGNQVSNFDSQVGPELSSIAPDHRHQHQGAGGQSNASQRRGPIPGTDYAGSSANMGFFMHIPNSSLASPVLPGSPIGGGSLPGGRSDVSSPNSGRRASIYAGWQGQREFENFSYQKPYSFLEELKAGKGRRFELSDIAGHVVEFSVDQHGSRFIQQKLENCSAKDKASVFQEVLPHASKLMTDVFGNYVIQKFFEYGTSDQRRDLANALSGQILPLSLQMYGCRVIQKALDVIELDHKAELVHELDGHVMRCVRDQNGNHVIQKCIECVPTEKISFIISAFRGQVASLSMHPYGCRVIQRVLEHCTDALQTQFIVDEILDSVCTLAQDQYGNYVTQHVLERGKPQERTQIIKNLCGQVVQMSQHKFASNVVEKCLEYGEPAARELLIAEVIGQSEENDNLLVMMKDQYANYVVQKILETCTDSQRDLLIGRIKVHLHALKKYTYGKHIVARFEQLFGEIQAQGSG*

Click here to download the sequence:
Link to NCBI Protein BLAST