Transcript Information: R_Transcript_58612.p1


Annotated TAIR IDAT4G24840.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12796525-12800926 | Reverse length=756
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.274880694341
Replicate 29.9033933452368
Replicate 313.792330805589
Condition 2: 8 Hour
Replicate 18.9362115815374
Replicate 210.252420132717
Replicate 313.129425863758
Condition 3: 24 Hour
Replicate 114.821245772826
Replicate 213.599290066917
Replicate 314.851341124838


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58612.p1 GENE.R_Transcript_58612~~R_Transcript_58612.p1 ORF type:complete len:759 (+),score=136.40,COG2|PF06148.7|2.9e-37,COG2|PF06148.7|1.4e+04,DUF3510|PF12022.4|3e-32 R_Transcript_58612:251-2527(+)
ATGGCGTCCCCAGATCTAGCCCCACCACCACCCCCGCGAACCCCAACAGACCTATTCGGGGACCCAATCGACGACTCTAACCCGTTATGGTTCAAGAAGGACCTCTTTCTCTCTCCAGATTTCGACCCGGAATCCTACATTTCGGACCTCCGTACCTTCGTCCCTTTCGAAACTCTCCGATCGCAGCTCCAATCTCACCTCTCCTCTCTCAAACACGAGCTCGTCGATCTAATCAATCGCGATTACAATGACTTCGTCAATCTCAGCACCAAGCTTGTCGACGTGGATTCTGCTGTTGCTCGTATGCGGGCCCCATTGTCGGATCTCAGAGAAAAGATTCTCGCTTTTAGGGTTTCTGTTGAGAGTTCTTTGGTTTCTATTAAGGAGGGCTTGAGGCAAAGAGCTGATGCTGCTAATGCTAGGGAGGTTCTCGAACTCTTGCTTGATGCCTTCCATGTTATCTCTAAGATTGAGAAATTAATAAAAGAGCTACCTAGTGTACCTGCTGATTGGTCAAATGGTGACCTGCATGTGTCAGAGAAGAGTCATCTGAGCAATGGAATGTCAGTGCAACAATCTGAGAGCGAATCAAATGTAAGAGAGACTCAGAGCATGCTTCTGGAGAGAATTGCCAGTGAAATGAACAGGTTGAAGTTCTATATGGCTCATGCGCAGGACCTACCTTTCATTCAGAACATTGAGAAGAGATTTCAGAGTGCTAGTCTTTTATTAGATGCAAGCTTGGGGCATTGCCTTGTAGATGGTCTAGAGCACCGAGATGAAATTGCCATATACAACTGTTTACGCGCCTATGCTGCTATTGACAGCACAACAAATGCTGAAGAAATTTTTCGAACAACTATTGTTGCCCCCTTCATACAGAAGGTGATTCCTCATAGTTCTTCAGGATTGATAGGTGAGGCTTCTGGGGATGAACTTGAAGCAGATTTTCAGGAAATTAAACGGCATATTGAGAAAGAGTGTACTTTCTTGTTGGGAATTTCTTCTCGAGAGAATGCGGGTTTTCATGTATTTGACTTCTTAGCCAATTCGATACTTAAAGAGGTTCTGTCAGCAATTCAAAAGGGAAAGCCCGGGGCTTTCTCACCTGGAAGGCCTACAGAATTTTTGAAAAATTACAAATCAACTTTAGATTTTCTCTCTCATCTGGAAGGCTACTGCACATCCAGATATGCCGTCTCCAAATTTAGGGCTGAGCCTATATATATTGACTTTATGAAGCAATGGAATCTTGGAGTTTACTTCTCATTGAGGTTTCAAGAAATAGCAGGGGCTCTGGATGCTGCTCTCATAGCTCCCAATCTAGTTGTAGCTCTTGATTCGAGTGAGGGGAGTAAATCTCCAGCTTTCACTTTGAAACAAAGTGTTGCTCTCTTTGAGAGTTTGAGATCTTGTTGGAGACAAGACGTCCTTGTCCTATCTTGCTCAGACAAGTTTCTTCGTTTATCTTTGCAGCTTCTTTCAAGGTACTACAATTGGCTGTCACTTGGATTTGATGCTCGGACATCGGGTAATGCAAATGCCAACCCTGGATCTGAATGGGCAATCTCTGCTGCACCAGAAGATTTTATATATGTTATTCATGACATAAAGCTTCTTGTAGCTGAGGTTTCTGGTGACTACCTTGGACATGTTATCCAGCTTCTTTCATCTTGCCCCACTGAAGTATTAGATTCTGTTAAACAGAGCATATTGCAGAGTGGGAAAGCTTTGGAGGATATTGCTCCTACAGTGATGCAATCAATTATAGACGCACTGGTTGAGAAGTCCGTTGAGGACCTAAGACAGCTGAAAGGGATAAGTGCAACATACAGGATGACCAATAAACCTCTTCCTGTCCGGCATTCTCCTTATGTTTCAGGGATACTTCGTCCTCTGAAGGTCTTCTTGGAAGGGGAGAGGGCTTCCACCTATTTGGATAGCACATCAAAAACAGAACTTCTACGTGGTACTGCACTTGAGATCACCAATAGATATAACGAATTGGCGTCAGACCTTGTCAATGTGGCAAGAAAAACGGCCACTTCACTACAGAAATTGCGGCGAGGTGCACAAAGGCGAGCTGGAGCAAGCTCCGATGGGACGGAAAATAATGTGTCTGATATTGATAAAATTTGCATGCAGTTGTTCCTTGATATACAGGAGTATGGTCGCAATCTAGCCGCCCTAGGAGTTGATGCTGCCGATATCCCTTCCTATCGGCTGTTGTGGCAATGTGTGGCACCTCAAGACAAGCAAAATACAATAACCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58612.p1 GENE.R_Transcript_58612~~R_Transcript_58612.p1 ORF type:complete len:759 (+),score=136.40,COG2|PF06148.7|2.9e-37,COG2|PF06148.7|1.4e+04,DUF3510|PF12022.4|3e-32 R_Transcript_58612:251-2527(+)
MASPDLAPPPPPRTPTDLFGDPIDDSNPLWFKKDLFLSPDFDPESYISDLRTFVPFETLRSQLQSHLSSLKHELVDLINRDYNDFVNLSTKLVDVDSAVARMRAPLSDLREKILAFRVSVESSLVSIKEGLRQRADAANAREVLELLLDAFHVISKIEKLIKELPSVPADWSNGDLHVSEKSHLSNGMSVQQSESESNVRETQSMLLERIASEMNRLKFYMAHAQDLPFIQNIEKRFQSASLLLDASLGHCLVDGLEHRDEIAIYNCLRAYAAIDSTTNAEEIFRTTIVAPFIQKVIPHSSSGLIGEASGDELEADFQEIKRHIEKECTFLLGISSRENAGFHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSTLDFLSHLEGYCTSRYAVSKFRAEPIYIDFMKQWNLGVYFSLRFQEIAGALDAALIAPNLVVALDSSEGSKSPAFTLKQSVALFESLRSCWRQDVLVLSCSDKFLRLSLQLLSRYYNWLSLGFDARTSGNANANPGSEWAISAAPEDFIYVIHDIKLLVAEVSGDYLGHVIQLLSSCPTEVLDSVKQSILQSGKALEDIAPTVMQSIIDALVEKSVEDLRQLKGISATYRMTNKPLPVRHSPYVSGILRPLKVFLEGERASTYLDSTSKTELLRGTALEITNRYNELASDLVNVARKTATSLQKLRRGAQRRAGASSDGTENNVSDIDKICMQLFLDIQEYGRNLAALGVDAADIPSYRLLWQCVAPQDKQNTITF*

Click here to download the sequence:
Link to NCBI Protein BLAST