Transcript Information: R_Transcript_58644.p1


Annotated TAIR IDAT3G63530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)BB, BB2
Annotation TypeOrtholog
Chromosome Positionchr3:23456407-23457787 | Reverse length=248
E-Value3.1E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.784462531038
Replicate 212.32576340228
Replicate 310.386860772344
Condition 2: 8 Hour
Replicate 16.6419147832608
Replicate 211.316235749588
Replicate 39.4065026696742
Condition 3: 24 Hour
Replicate 112.1760030236
Replicate 210.536520441652
Replicate 312.760443218272


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58644.p1 GENE.R_Transcript_58644~~R_Transcript_58644.p1 ORF type:complete len:247 (+),score=30.61,zf-RING_2|PF13639.2|1.5e+04,zf-RING_2|PF13639.2|5.6e-12,zf-RING_11|PF17123.1|4.4e-08,zf-RING_11|PF17123.1|1e+03,zf-C3HC4|PF00097.21|6.1e-07,zf-C3HC4_2|PF13923.2|1.8e-06,zf-rbx1|PF12678.3|7.7e+03,zf-rbx1|PF12678.3|4.2e-06,zf-C3HC4_3|PF13920.2|6.1e-06 R_Transcript_58644:226-966(+)
ATGAATGGGAATAGGCCAATGGAGGTGTATTATACCAACACAGGATATCCCTATACAGTTCATGATGGAGGCTATATGGGCTTTTTTGATCACCACCCACCTGTAAATTATCTTTACCCACCTGCTGTTCCTATGCATAATCATCAGGAAACTGCATATTGGTCAATGAATATGAACTCATACAGATCTGATTTCTCTGTTGCCGGAAGTACCTCGTATTATGGTTATGAGGTCAATGATCCTTTGCCAAGAACTGAAATTAACCGAAGAACTTGGGAGTATCCTTCATCAATGCACATTGAAGAGCCAACCATGGATATGCAATCTGAAGAAAATATAGTCACGAGTTCAGATGGTGCTGAAGAATGCCCTGTCGATCATCCTGAACCAGATGCAGAGAGCCCCGAGGACGCTTGGCAGGATAACATCGATCCTGATAACATGACATACGAGGAATTGCTTGACCTAGGTGAGGCTGTTGGAACTCAAAGTCGAGGCCTTTCCCACGAGCTTATCAAGTTGCTTCCAACCTCACGGTACAAGGCAGGTGGTTTTTTCTCAAGAAAAAAGTCAAAGGAAAGATGCGTGATATGCCTCGTGAGCTATAAAATAGGGGATCAACAGATAACATTGCCATGCAAACATGTATACCACTCCAAATGCGGCAGGAAGTGGCTTAGCATTAACAAGACATGTCCAGTCTGCAATAGTGAAGTATTTGCGGATGAACCGAGGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58644.p1 GENE.R_Transcript_58644~~R_Transcript_58644.p1 ORF type:complete len:247 (+),score=30.61,zf-RING_2|PF13639.2|1.5e+04,zf-RING_2|PF13639.2|5.6e-12,zf-RING_11|PF17123.1|4.4e-08,zf-RING_11|PF17123.1|1e+03,zf-C3HC4|PF00097.21|6.1e-07,zf-C3HC4_2|PF13923.2|1.8e-06,zf-rbx1|PF12678.3|7.7e+03,zf-rbx1|PF12678.3|4.2e-06,zf-C3HC4_3|PF13920.2|6.1e-06 R_Transcript_58644:226-966(+)
MNGNRPMEVYYTNTGYPYTVHDGGYMGFFDHHPPVNYLYPPAVPMHNHQETAYWSMNMNSYRSDFSVAGSTSYYGYEVNDPLPRTEINRRTWEYPSSMHIEEPTMDMQSEENIVTSSDGAEECPVDHPEPDAESPEDAWQDNIDPDNMTYEELLDLGEAVGTQSRGLSHELIKLLPTSRYKAGGFFSRKKSKERCVICLVSYKIGDQQITLPCKHVYHSKCGRKWLSINKTCPVCNSEVFADEPRS*

Click here to download the sequence:
Link to NCBI Protein BLAST