Transcript Information: R_Transcript_58692.p1


Annotated TAIR IDAT4G36860.1
Annotated Gene NameLIM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17358580-17361189 | Reverse length=553
E-Value1.7E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1018847820434
Replicate 20.7164092005561
Replicate 30.12024534171209
Condition 2: 8 Hour
Replicate 10.25706944826504
Replicate 20.35213987151473
Replicate 30.23821011312844
Condition 3: 24 Hour
Replicate 10.36154027130243
Replicate 20.11577563722088
Replicate 30.63192848177394


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58692.p1 GENE.R_Transcript_58692~~R_Transcript_58692.p1 ORF type:complete len:381 (+),score=76.59,LIM|PF00412.18|1.9e-09,LIM|PF00412.18|0.032,LIM|PF00412.18|3.1e+02,DUF3633|PF12315.4|2.7e+03,DUF3633|PF12315.4|7.8e-08 R_Transcript_58692:441-1583(+)
ATGGGTTGGCTGAGTAAGATTTTTGGAGGCTCCAGTCATAACCATAGAGGGCATTATCATGGCAGATATGGCGAGGACACAATCTGGGATGGCCCTACCACTTCCGCGGATGCATATTCAGACTATGACAATGAAGATATTGATCGTGCAATTGCACTGTCTCTAGCGGAAGAAGAGGAGAGGGAGCTGAAAAGAAAAGAAGAAGAAGAGAGGGAACTGGAAAGGAAAGAAGAAGAGGAGAGAGAACATAAAAGAAAAGAGGAAGAGGATCAGAAAGGCAAAAAGGTGATTGATCATGATTGTCAATTGGAGGAAGATGAACTTCTCGCCAAGGCTCTTCAAGAAAGTTTAAACATGGAATCTCCTCCTCGAACTCCACCGCGATCTCCTCCCAGACATGATAAGGGCAGTATGTGGCAACCATATCCGTTCTTTACTTATGGATTCAGTCGGACTTGTTCTGGTTGCGGTGCTGAGATTGGTCGTGGACGTTATTTAAGCTGTATGGGAGGGTTTTGGCACCCAGAATGCTTCCGTTGTCATGCTTGCAATGAGACAATATCTGACTATGAGTTCTCTATGTCACGGAATCGTCCATACCATAAATCTTGCTACAAGGAGCAGCACCATCCAAAGTGTGATGTCTGCAGAAACTTTATACCAACAAACGCAGCTGGACTTATCGAGTATAGAGCACATCCTTTCTGGATGCAAAAGTACTGCCCTGCACATGAACATGACAGGACTCCAAGGTGCTGTAGCTGTGAAAGAATGGAGCCAAGGGACACGAAATACTTGGTACTTGATGATGGTCGGAAGCTATGCTTGGAGTGTCTAGATTCTGCTATCATGGATACTAATGAATGCCAACCACTTTATATTGAGATCCGAGAATTTTATGAAGGATTGAACATGAAAGTGGAACAACAAATACCATTACTCCTTGTGGAGAGGCAAGCACTAAATGAGGCTATGGAAGGAGAAAAACAAGTACAAGAGGACCTATGCTGTGTTTTTCTTGGTAAAAAGATTGTATTCCTTGTGATTCTCACTATTGCTTTTTTTGCTGTCAGGGCCATCATCACTTGCCAGAGACAAGAGGACTCTGTCTATCAGAAGAGCAGACTGTCCGCACGATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58692.p1 GENE.R_Transcript_58692~~R_Transcript_58692.p1 ORF type:complete len:381 (+),score=76.59,LIM|PF00412.18|1.9e-09,LIM|PF00412.18|0.032,LIM|PF00412.18|3.1e+02,DUF3633|PF12315.4|2.7e+03,DUF3633|PF12315.4|7.8e-08 R_Transcript_58692:441-1583(+)
MGWLSKIFGGSSHNHRGHYHGRYGEDTIWDGPTTSADAYSDYDNEDIDRAIALSLAEEEERELKRKEEEERELERKEEEEREHKRKEEEDQKGKKVIDHDCQLEEDELLAKALQESLNMESPPRTPPRSPPRHDKGSMWQPYPFFTYGFSRTCSGCGAEIGRGRYLSCMGGFWHPECFRCHACNETISDYEFSMSRNRPYHKSCYKEQHHPKCDVCRNFIPTNAAGLIEYRAHPFWMQKYCPAHEHDRTPRCCSCERMEPRDTKYLVLDDGRKLCLECLDSAIMDTNECQPLYIEIREFYEGLNMKVEQQIPLLLVERQALNEAMEGEKQVQEDLCCVFLGKKIVFLVILTIAFFAVRAIITCQRQEDSVYQKSRLSARF*

Click here to download the sequence:
Link to NCBI Protein BLAST