Transcript Information: R_Transcript_58836.p1


Annotated TAIR IDAT1G73380.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1308 (InterPro:IPR010733); Has 162 Blast hits to 160 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27589100-27590657 | Forward length=434
E-Value4.1E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3011843818875
Replicate 24.1555177907257
Replicate 36.2039080989579
Condition 2: 8 Hour
Replicate 14.897172989449
Replicate 25.5436352897939
Replicate 37.4119076699913
Condition 3: 24 Hour
Replicate 17.3656298188884
Replicate 25.2840724425341
Replicate 38.2990880271152


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58836.p1 GENE.R_Transcript_58836~~R_Transcript_58836.p1 ORF type:complete len:480 (+),score=84.05,DUF1308|PF07000.7|2.5e-79 R_Transcript_58836:37-1440(+)
ATGGACAGGGAAGAGGCAACAAAGAGGTGCAAATCAGCAGTGAAAAGAATCCATTCCTTGCCAACCTCCTCCAAAATCACAGCTTCCTGTAAAACCACTCTCCTTCGTTTGGTCAATTCTGAGCTCAACTTTCTCTCTCGCCTCTCTATTTCTCCCTCACCCTATTCATCTTCTATCAGTTGTAATGTTGGTTATCTGGAGGCCATTGTTCACATACTTGAACAACCCTACATATCTGGAGTGTCCCGTATATGCAAGTCCATCCCCATATCATCTGAAACTGGTATTAATGAGAGAAATGATTGCAAATGTGAAACTGTTCATATTGATATTGTTTGTAGTTTCCACAAAAGACCCACTTGGTTTATCGTATCGGATCGAAACCCCAAGTGTATATCTTGGAATGGTAAAGGGAAAAATGATAAGGGTCTTAGAAAGCGGATTGAAGGAATACTTCATGCTGCTCGGAATTCGCAGGCGCTAAGGCCTGCCTTTGTGGTTTTGTTTTTTGCGAATGGACTTGAGTTGCGTTTGAATGAGATGTTGGTGAAGGAGTTTTGGTTCAGAGAGTTGAAATTGGATTTTTTGCATTATGATATTGAGTTTGTTGATGCATTAGATGGTGAATGGATCAATGTTCTCGGAAAATCATATCATAGAGCATGCACTCTGATTCGGGATGTTGGTGATGCTCCAAGGACTTGTGGTAGAATTGATAGTGTGGCGGAGTTGAGTTTCGGTTGTGTTGTGAATGAGTTGACGGACAAATATGATGGGCTGGGTCTAGGGCCGTCATTCAATTCTCTGATTGCGGGAACGAGAGAATGGCCTTTGCATTTGAATGATATGCCATCTGGGAGTAGAGGGGACCTTGGATTGAGGGATGAGGATCTGGTCAATTTCGACACAACAGCTTTGATTGCTATTGTATCTGGAATAAGTAACGGTGGTGCAGAAAAGATATTGGCAACACCTGAGAATGAATTGAGGCAGCGGTTTAAGATTAACATGGAGTTTGTAATCTCTCAGGCACAGTCAGAAATAAAGAGCCCAATCCATGTTGAGTTATGTTCTACTTTATCTGCAACAAGAGGTATTGCATGTGAAAGTGTCCATTCAGAATTTATGGAGTTGGTGTCGATGTGTGGGGGACCTAATGAGAGACTAAGAGCTGATCAATTGGTGAAGCGTCTCAAGATTGTTCCTGATAGTCCTTCACCACGCATTATGTGCCTCCCGACAACCAGAAAGCTGGCTTTGAAGAACAAGGTTACATTTGGCACTGGAGATTACTGGGGTGCTCCTACTTTGACAGCGAACATGGGATTTGTGCGAGCTGTTTCACAGACTGGGATGTCGCTGTTCACTCTTGAACACAGACCACGGGCACTTATTGGAGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58836.p1 GENE.R_Transcript_58836~~R_Transcript_58836.p1 ORF type:complete len:480 (+),score=84.05,DUF1308|PF07000.7|2.5e-79 R_Transcript_58836:37-1440(+)
MDREEATKRCKSAVKRIHSLPTSSKITASCKTTLLRLVNSELNFLSRLSISPSPYSSSISCNVGYLEAIVHILEQPYISGVSRICKSIPISSETGINERNDCKCETVHIDIVCSFHKRPTWFIVSDRNPKCISWNGKGKNDKGLRKRIEGILHAARNSQALRPAFVVLFFANGLELRLNEMLVKEFWFRELKLDFLHYDIEFVDALDGEWINVLGKSYHRACTLIRDVGDAPRTCGRIDSVAELSFGCVVNELTDKYDGLGLGPSFNSLIAGTREWPLHLNDMPSGSRGDLGLRDEDLVNFDTTALIAIVSGISNGGAEKILATPENELRQRFKINMEFVISQAQSEIKSPIHVELCSTLSATRGIACESVHSEFMELVSMCGGPNERLRADQLVKRLKIVPDSPSPRIMCLPTTRKLALKNKVTFGTGDYWGAPTLTANMGFVRAVSQTGMSLFTLEHRPRALIGD*

Click here to download the sequence:
Link to NCBI Protein BLAST