Transcript Information: R_Transcript_58843.p1


Annotated TAIR IDAT4G27680.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13821263-13823083 | Forward length=398
E-Value3.1E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.02207247628
Replicate 226.717657342076
Replicate 329.443107450067
Condition 2: 8 Hour
Replicate 126.814854672304
Replicate 233.052717374503
Replicate 341.062769526839
Condition 3: 24 Hour
Replicate 134.643272089106
Replicate 235.662616560856
Replicate 336.573285466538


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58843.p1 GENE.R_Transcript_58843~~R_Transcript_58843.p1 ORF type:complete len:389 (+),score=85.00,AAA|PF00004.25|3.5e-37,AAA_5|PF07728.10|2.5e-06,RuvB_N|PF05496.8|3.8e-07,AAA_25|PF13481.2|0.011,AAA_25|PF13481.2|0.06,AAA_17|PF13207.2|8e+02,AAA_17|PF13207.2|5.7e-05,Bac_DnaA|PF00308.14|1.2e-05 R_Transcript_58843:363-1529(+)
ATGGGGAGTTCGGATACAAAGTTCTTGCAAGAGTTGGTATTATATGCAGCAAGTGCAGCCCTAAGTTGCTTGGTATTATTTGCAGGGCTTAAACACTTAGACCCAAATCGTGAAGCCTCCAAAAAGGCTCTTGAACATAAGAAAGAGATTGCTAAGCGTCTGGGTCGTCCTCTAATTCATACCAATCCTTATGAGGATGTAATAGCATGCGATGTTATAAATCCTGATCACATTGATGTGGAGTTTAATTCTATCGGGGGTTTAGACAGCATCAAGCAGGCACTCTTTGAGTTGGTGATTCTTCCTCTGCGGAGACCTGAGTTGTTTTCATATGGCAAACTGCTTGGGCCCCAAAAGGGTGTCTTATTGTATGGTCCTCCTGGAACTGGGAAGACAATGCTTGCCAAAGCTATTGCTAAAGAATCTGGAGCTGTTTTTATCAATGTGAGGATATCAAATTTGATGAGCAAATGGTTTGGAGATGCACAAAAACTTGTTGCTGCTGTATTTAGCTTGGCCTACAAACTACAGCCTGCTATTATATTCATTGATGAGGTTGATAGCTTTTTGGGACAGCGTAAGAATTCTGATCACGAAGCAATGACAAATATGAAGACAGAGTTTATGGCTTTGTGGGATGGGTTTACCACTGATCAAAATGCCCGAGTGATGGTTCTCGCTGCGACAAACCGTCCTTCAGAACTTGATGAGGCAATTCTTCGTCGTTTCTCTCAGGCCTTTGAGATTGGTATGCCTGATCGAAAAGAGAGGGCAGCAATATTGAAAGTTATTTTAAAGGGGGAAAGGGTTGAGGAAAACATTGACTTTGACTACCTTGCCAGCTTGTGTGATGGATACACTGGTTCTGATTTATTTGAGCTGTGCAAAAAGGCTGCATACCTTCCAATTAGGGAGCTCCTAGATGATGAGAAGAGTGGGAAACCCTATCATGCTCCCAGGCCACTGAAGCAAGCTGATTTAGAACAAGTCCTTGCCACGTCGAGAAAGACAAAAGTGGCTGCTCATGAATACACGAGGCTAATGTCGCAATCTTCCTCTTGGCTGATACAGAGGGAGGGAGAAGATTACCCTTTAAATACAATCAATGAGCTTTCGAAGCTCGTTTCCCATTTATTGAGCATGCAAGCTGACAACCAAGACACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58843.p1 GENE.R_Transcript_58843~~R_Transcript_58843.p1 ORF type:complete len:389 (+),score=85.00,AAA|PF00004.25|3.5e-37,AAA_5|PF07728.10|2.5e-06,RuvB_N|PF05496.8|3.8e-07,AAA_25|PF13481.2|0.011,AAA_25|PF13481.2|0.06,AAA_17|PF13207.2|8e+02,AAA_17|PF13207.2|5.7e-05,Bac_DnaA|PF00308.14|1.2e-05 R_Transcript_58843:363-1529(+)
MGSSDTKFLQELVLYAASAALSCLVLFAGLKHLDPNREASKKALEHKKEIAKRLGRPLIHTNPYEDVIACDVINPDHIDVEFNSIGGLDSIKQALFELVILPLRRPELFSYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRKNSDHEAMTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRFSQAFEIGMPDRKERAAILKVILKGERVEENIDFDYLASLCDGYTGSDLFELCKKAAYLPIRELLDDEKSGKPYHAPRPLKQADLEQVLATSRKTKVAAHEYTRLMSQSSSWLIQREGEDYPLNTINELSKLVSHLLSMQADNQDT*

Click here to download the sequence:
Link to NCBI Protein BLAST