Transcript Information: R_Transcript_58872.p1


Annotated TAIR IDAT1G30450.1
Annotated Gene Namecation-chloride co-transporter 1
Annotated Gene Symbol(s)CCC1, ATCCC1, HAP5
Annotation TypeOrtholog
Chromosome Positionchr1:10762905-10769061 | Forward length=975
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.490754184475
Replicate 211.9794842866
Replicate 314.427965602485
Condition 2: 8 Hour
Replicate 110.865915528737
Replicate 210.974665934324
Replicate 316.685376224671
Condition 3: 24 Hour
Replicate 113.990647349398
Replicate 212.01989058147
Replicate 313.696600478917


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58872.p1 GENE.R_Transcript_58872~~R_Transcript_58872.p1 ORF type:complete len:978 (+),score=174.90,AA_permease|PF00324.17|2.7e-57,SLC12|PF03522.11|7.1e-13,SLC12|PF03522.11|1.1e-26,AA_permease_2|PF13520.2|2.2e-13 R_Transcript_58872:410-3343(+)
ATGGATGATGTCGAAATTGAAGAAGGAGGTGCAGGAGGAGAGGAAAGTGGATTCCCATTGGGTAGGAAATACAAGCCTGTTGTTGCTGATGATCGTGCTGTTCTTGAAATGTCCTCTCTAGATCCTTCTTCCTCTGATAATCCCAGGAAACTTAAGGTGAACACAGACGGAAACATGAGGCCGGATGGGGTAGAAAGCTCAACGGCTTCACATGCTGATGTTAATGGTATACAGAGGGAGTCAAAACTTGAATTGTTTGGTTTTGATTCCCTTGTGAATATTTTGGGTCTCAAAAGTATGACTGGAGAGCAGATTCATGCCCCTTCTAGTCATAGAGATGGAGAGGATGTTTCTATTACTCTTGAGCGTCCAAAGACTGCTGATATCAAATTGGGAACGGTGATGGGTGTATTTTTGCCATGCTTGCAAAATATATTGGGCATCATTTACTACATTCGGTTTACCTGGATTGTAGGTATGGCTGGTGTAGGCGAGTCTTTGTTACTTGTGTCTTTCTGCTGTTTGTGCACGTTCTTGACTGCAGTGTCATTGAGTGCAATTGCCACAAATGGTGCAATGAAGGGTGGGGGGCCATATTATCTCATTGGTCGAGCCCTTGGTCCAGAAGTTGGTGTTAGCATTGGACTATGTTTCTTCCTCGGCACTGCAGTTGCTGGAGCTCTGTATGTGCTGGGAGCTGTTGAAACCTTCCTTAGTGCTGTACCTGGTGCTGGGATTTTTACAGAGACAATTACGAAAGTGAATGGCACAACAGTCAGTCCCATACACCAAACAAGCGTGCATGATCTACAAATTTATGGGATTGTTGTGACAATTCTTCTTGTTTTTATCGTGTTTGGTGGCGTAAAGATGATTAATCGAGTAGCGCCTGCTTTCCTCATACCAGTTTTGTTCTCAGTGTTCTGCATATTCATTGGAATTTTTGCTTCTGGGAAAGACAAGCCTGCTGAGGGAATCACTGGCATGAGTTTGACAACATTCAAAGATAACTGGAGTTCTGATTACCAAATGACAAATGAAGCTGGCATACCTGATCCAAATGGGAAAGTTTACTGGAGTTTCAATGCTTTGGTTGGTCTTTTCTTCCCTGCTGTAACTGGTATCATGGCTGGTTCAAATCGTTCAGCTTCACTCAAAGATACTCAGCGTTCAATACCTGTTGGCACACTGGCTTCGCAACTTACAACCACTTGTCTATATCTGGTCTCAGTTTTGGTTTTTGGTTCTTTTGCGACCCGTGAGAAGCTTCTGACAGACAGGCTACTTACAGCAACAGTTGCTTGGCCTCTTCCAGCAATAATTTATGTGGGAATTATTCTTTCAACCTTGGGTGCTGCACTTCAGAGTCTGACAGGCGCCCCACGTCTTTTAGCGGCAATAGCAAATGATGATATTTTACCTGTTCTTAATTACTTCAAGGTGGCTGATGGGAGAGAGCCTCATATTGCTACCCTCTTTACTGCCTTCATTTGTCTTGGCTGTGTTGTGATTGGGAATCTGGATATTATCTCTCCCACGATCACTATGTTTTATCTGCTGTGTTATGCGGGTGTGAATTTATCCTGCTTCCTTCTGGACCTTCTAGATGCCCCTAGCTGGCGTCCACGGTGGAAATTTCACCACTGGAGCCTCTCACTTCTTGGAGCATCTATCTGTATAGTGATTATGTTCTTGATCTCCTGGTCATTCACCATTATAGCTCTAGCGCTTGCTTGCCTTATTTACAAATATGTGTGCCTGAAAGGGAAGGCTGGAGACTGGGGTGATGGCTTCAAAAGTGCATATTTTCAACTTGCACTTCAGAGTCTCCGTTCTCTTGGAGCAAACCAGGTGCACCCGAAAAACTGGTATCCAATTCCCCTTATATTTTGTCGCCCTTGGGGAAAACTACCTGAGAATGTACCATGTCATCCAAAGCTTGCAGATTTTGCAAATTGCATGAAGAAGAAAGGTCGTGGAATGTCAATATTTGTTTCTATCCTTGATGGGGATTATCATGAATGCGCTGAAGATGCCAAAGTTGCCGGCCAGCAGTTGAGTGCATATATTGAATACAAGCAATGTGAAGGTGTGGCAGAGGTTGTGGTGGCTCCCAACATGTCTGCTGGTTTCCGTGGCATCATCCAGACCATGGGCCTCGGAAATCTCAAACCTAATATCGTGGTTATGCGGTATCCTGAAATTTGGCGTCGTGAAAATCTAACGGAAATCCCGGCAACCTTTGTTGGAATAATTAATGACTGCATTGTGGCAAATAAGGCAGTGGTCATTGTCAAGGGCCTTGAGGAGTGGCCCAACGTTTATCAGAGGCAGTATGGTTCAATCGATCTTTATTGGATTGTACGAGATGGAGGTTTGATGTTGCTTCTTTCGCAGCTTCTCCTGACCAAAGAGAGCTTTGAGAATTGCAAGATTCAAGTATTCTGTATTGCAGAAGAGGATTCTGACGCCGAAGGGCTCAAAGCTGATGTGAAGAAGTTCCTTTACGATTTGCGACTTCAGGCAGAAGTTTTTGTTATAACGATTAAAACATGGGACGCTCAAGCAGATGGTGGGTCTGCACAGGACGAATCTCTTGAAGCATTCACAGCTGCTCAGCGACGGATTTCTGACTACTTGTCGAAGATGAAGGAAACAGCTGAGACAGAAAAGACCCCACTGATGGCAGATGGGAAGCAGGTAATTGTGAACGAGCAACAAGTCGAGAAGTTTCTCTACACCACCTTGAAGTTGAATTCAACAATACTAAGATACTCGAGAATGGCTGCTGTAGTACTTGTTAGCCTACCGCCACCACCTCCCAGTCACCCAGCATATTTCTACATGGAGTATTTGGATCTCCTTGTGGAAAATATTCCTAGGCTTTTAATCGTAAGAGGATACAGAAAAGATGTGGTTACTTTGTTCACGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58872.p1 GENE.R_Transcript_58872~~R_Transcript_58872.p1 ORF type:complete len:978 (+),score=174.90,AA_permease|PF00324.17|2.7e-57,SLC12|PF03522.11|7.1e-13,SLC12|PF03522.11|1.1e-26,AA_permease_2|PF13520.2|2.2e-13 R_Transcript_58872:410-3343(+)
MDDVEIEEGGAGGEESGFPLGRKYKPVVADDRAVLEMSSLDPSSSDNPRKLKVNTDGNMRPDGVESSTASHADVNGIQRESKLELFGFDSLVNILGLKSMTGEQIHAPSSHRDGEDVSITLERPKTADIKLGTVMGVFLPCLQNILGIIYYIRFTWIVGMAGVGESLLLVSFCCLCTFLTAVSLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGTAVAGALYVLGAVETFLSAVPGAGIFTETITKVNGTTVSPIHQTSVHDLQIYGIVVTILLVFIVFGGVKMINRVAPAFLIPVLFSVFCIFIGIFASGKDKPAEGITGMSLTTFKDNWSSDYQMTNEAGIPDPNGKVYWSFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPVGTLASQLTTTCLYLVSVLVFGSFATREKLLTDRLLTATVAWPLPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVADGREPHIATLFTAFICLGCVVIGNLDIISPTITMFYLLCYAGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGASICIVIMFLISWSFTIIALALACLIYKYVCLKGKAGDWGDGFKSAYFQLALQSLRSLGANQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKVAGQQLSAYIEYKQCEGVAEVVVAPNMSAGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLEEWPNVYQRQYGSIDLYWIVRDGGLMLLLSQLLLTKESFENCKIQVFCIAEEDSDAEGLKADVKKFLYDLRLQAEVFVITIKTWDAQADGGSAQDESLEAFTAAQRRISDYLSKMKETAETEKTPLMADGKQVIVNEQQVEKFLYTTLKLNSTILRYSRMAAVVLVSLPPPPPSHPAYFYMEYLDLLVENIPRLLIVRGYRKDVVTLFT*

Click here to download the sequence:
Link to NCBI Protein BLAST