Transcript Information: R_Transcript_58987.p1


Annotated TAIR IDAT1G16800.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5745523-5755263 | Reverse length=2127
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3497082563125
Replicate 21.0442864455151
Replicate 31.6888525085519
Condition 2: 8 Hour
Replicate 11.8912429333156
Replicate 22.6822590856893
Replicate 33.7067946790609
Condition 3: 24 Hour
Replicate 12.82102955987
Replicate 21.7809395710355
Replicate 32.2668951021538


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_58987.p1 GENE.R_Transcript_58987~~R_Transcript_58987.p1 ORF type:complete len:1709 (+),score=411.90,AAA_11|PF13086.2|9.6e+02,AAA_11|PF13086.2|8.5e-64,AAA_11|PF13086.2|1.6e+04,AAA_12|PF13087.2|6e-60,AAA_19|PF13245.2|6.1e-11,AAA_30|PF13604.2|0.025,AAA_30|PF13604.2|1.2e+04,AAA_30|PF13604.2|0.00014,Viral_helicase1|PF01443.14|2.6,Viral_helicase1|PF01443.14|2.6,Viral_helicase1|PF01443.14|5 R_Transcript_58987:1957-7083(+)
ATGATGGCGGAGATGGTAATCCGTCAAAAAAACTCAGTGAGTGTGTCAACAATGTGTATCCCTTTGATAAGAACATTCAGGAGATTAGGTGCACACTTTGTCGTTCAAATGGAGCAAGGCGAACTTCAGAGACAGTGGACTTGGGAACCGGAGATGGGTGAAAGCCTGATTCTTTTGTTTTCAGACCCCAATGATAATGTGAGGCAAGTCGGTAGGCGTATCTTGGAACATGTCTCAAATACACGTGGTCTTGCTCCTGGTTTGCAGTTCCTCTGCCGTTTCGTATCTTCATTGGCTGCCATTCTTGCAGGCTTAAAGCATGCATTAAAGCTGGTACAGCTGGACTCAGTTCTTGTCAATTTCCAGAGCCTGCATCATTTTTTCTTTGTCCTGTGCAAAGTTTTTAAGGAAGGGTTTTCATCGACCAATCATGTTTTGGGAAAACCATCAGATGATTTAAATCTCAAGTATACCAGCCAAGGAGGGTTCTTGCGGCAGCCAACATTTGATTGTTTCCATGCTGATGATGGAAAGGCGTTGTTAAGAGATGAGAAGAAATTGTGGGAGAACTTCAGCATTGAGCTTGCCAATGTGGCATGGGCTTCTTTGAAGAAGTGCCTACATGAAGGAAAGGCATTTATAGACTACAGAATTTCCCAGATGACTTGTGTCCGTTTGCTTGAAATTCTGCCTATCGTGCTTGGTAAACTTAGTCCATCTCTGGATGTAAAATCTTCAAAGATGATGCAGAGTTTATCTGATTTTAGCTGGCTCTGTGATTTGATGGATTGGGGGAAGTCCTCACTTGAAGCAGTAATCCGATATTGGAAGCAATCTGTCTCTTCCTTGCTCACTTTACTGAAGAGTTCATGTGATGGAAACTCAGCAGAAATTATCAGATCCGTTGAAAAGATGATCTCTTCCAATGAAATTCAGATGGATTCATTAACAGAGCAAGTTTCATGTCTCTCTGTTTCGTTGCAAACTAAGGGTTCATATGATAAAAGCAATTTGAAGTCAAAACCTTTTGATGGATACAGAACAAAGAATTTACCTGTGGGTGTGGAGTCGTCTGCCCATGATGATGATGCTGATTTGCAAATTTTAGATTCTCCAACAAATACAAATGAGATAATTAAGGATAGTATAATTCTTCTTTCAGATGAAGAGACAGAACCTTCAATTTCTCCTACTGGTGTTATTGGAGATGATGCAAAGCCAACTGAGGCTAAAGTTTTGGCTCCTGCCACTGTTAGGAAAGTTTCACACCATGACAGGGAAAAGAAGACTTCTTCTGAAGCTAAAGCTTCACAGTATATGTCAGAAGCTTCTCAAACAAGGGTTGCACCTAAACCTGCTCCTCCTCTTGGTTCAATGTCCCAGAAGTCTGGTGTAACAAAACAAGCCTTAACATCAGCATCTCTTTCGAAAAGAAAACACTCTGAGGTTGGAGAAAAGAACATAATGGCTAAGAGCATTCCAAATGAACACCTCTCATCCGTTGATAAAGCAATTGTGAAAAAGTCTTTTGAAGCTGCCAAAACCAGCACATGCAAACAAACAGGTTCTGAATCAAACAACGCAATATTAAAAGAGTTGGTGTGTGACACTGAAGATCCATTGGAGCTTGCTTTGAAGTCTGCTGGACGTAGTCATTCATCTTTGACAAAGCAGGTGTCATCTCTTCCTAAACGACGAGTTATTCAACTTGCAGCTCCCGTGGATAATAGATCTGCATACTTACGCAAGCTGGAGGCTGCAGCCAGACGATTTAAGCCTCCGAACTTGGATGATTGGTTTAGACCGATACTAGAGATGGACTATTTTTCTTCTGTAGGATTGGCTTCTGCTCATGAAGAGGAGATTAAGACTCCTTGTGATTTGAAGGAGGTTCCTGTAAGTTTTGAGTCATCTCAGCAGTATGAAGATATTTTCCGACCCTTGGTCCTTGAAGAGTTTAAAGCACAATTGCGTAGTTCTTTCCAAGAGGTGCCTTCATTAGAAGAAATGTCATGTGGCAGTTTATCTGTGGTTTCGGTTGAAAGAATTGATGACTTCCATCTTGTTAGGTGCGTCCATGATGAGCTCGAGCTTGCTGTATCTAACAGCTGTATGGAGAATGACTTAGTGTTGCTCACTAAACATCCTTTGGCAAAGTCTCCACATAATGTTCATATAATTGGGAAGGTAGAGAAACGTGAAAAAGACAACAAAAGAAGGCAGAACATGCTACTTATTAGATTCTATCTTCAAAGTGGTCACTCACATCTAAATCGAGCTAGGAAGATGCTTCTTGAACGGAGCAAATGGTTCTTGAGTCGTATTATGAGCATTACGCCTCAACTTCGAGAATTCCAAGCACTTTCTTCTATTGATGTCATTCCTGCTCTTTCAGTCATTTTGAAACCTGCCTATCATTCTCATGCTTTTCATGAGCGCAGAAAGGTAGGTTTGGGGAAGTTGTCACAATCTATGCAGCAAGTTCTGAGGTCCACCTTTAATGAAAGTCAGATTCAAGCAATTAGTACTGTTATTGAAGCCCCGGATTGCAGGGATGATTTTGAGCTGTCTCTTGTCCAAGGTCCTCCAGGTACTGGAAAGACTCGTACTATTGTGGCTCTTATCAGCGCATTGTTAGCCGCATCATCACGGTCAAATGCTATGGGAAATCAATCTACAAGCAGTATGAATGTGAACTGCACTCCAACCACCAATTCTAGGGCATGCATAAGTCAGTCAGCTGCAGTTGCTCGGGCATGGCAAGATGCTGCCTTGGCTAGACAACTGAATAATGACATGGAGAAGGATAAGAAAGTACAAAAGTCATCGTCGAGGAAGAGGGTGCTTGTTTGTGCTCAATCAAATGCTGCTGTTGATGAATTAGTTGCAAGGTTAGCTGGTGAAGGGCTATATGGTGTTGATGGAAACATGTACAAGCCCTACCTTGTACGAGTTGGCAATGCAAAAACAGTACATCAGAATTCACTGCCCTTCTTCATTGACACACTAGTGGAACAACGTCTTGCTGAAGAAAAGATGTCTGCAGGAAATGGAGGTAACGAGTTGAGTGAAGAAACATCTGCAATGCTTCGTGAGAATCTGGAGAAAATTGTTGATCGTATAAAGTGCTATGAATCTAAACGTGCCAATTTGAAAGATGGAGGGTCTGAGAAAAATTGTGATTATGAACATCTTGAAGCTGATAAGGGCAAGAAATTATCTAATGCGGAGCTGGAGGCTAGGTTGAGAGTCCTATATCAGCAGAAGAAGGAGATCTACATGAGGCTTGCAACAATACAGTCACGGGAGAAGAAAACTAATGAGGAAATCAGAGGATTGAGGAATAAACTACGGAGATCAATACTAAGGGAAGCTGAAATTGTGGTCACTACATTGAGTGGCTGTGGTGGTGATTTATATGCAGTATGCTTTGAATCCACATTTTATTGTAAGGGAGCCAACTTATCTGAACAAAACTTGTTTGATGCTGTGGTCATTGATGAAGCTGCCCAGGCTTTGGAGCCAGCCACCTTGATACCTCTTCAACTTCTCAAATCAAGTGGTGCAAAGTGCATCATGGTTGGTGATCCAAAGCAACTTCCTGCCACAGTTCTTTCTAATGTTGCCAGCAGATATTTGTATGAATGCAGCATGTTTGAGCGTTTGCAAAGGGCTGGACATCCAGTAATTATGCTTAGAGAACAATATCGGATGCATCCAGAGATAAGTCGGTTTCCTTCTTTGCATTTTTATGATGGCAAGTTACTAGATGGTGCTCATTTATCTAGTAAAACGGCACCATTTCATAAGACTAAGGGTCTTGGACCTTATGTCTTCTATGATATCAGGGACGGTCAGGAGTTCTTTGGTAAAAATTCTGGGTCCTCCTCCCTTTATAATGAAGGGGAAGCAGATGCTGCTATTGAAATAGTGCGATTTCTCCAGAAAAGGTATCCTTTTGAGCTTGCTGGTGGAAGAATAGGGATTATTACACCATATAAGTGCCAAATTTCGCTCCTACGTTCAAGGTTTTCCAGTGTATTTGGATCTTCTTTTTGCTCTGAGATGGAATTTAACACCGTTGATGGTTTCCAAGGCAGGGAAGTTGACATACTGATCCTCTCCACGGTTAGATCTTCTGATAGAAGTTCTGCATCTGCTAGGATGAACTCTACTAGCATTGGGTTTGTTGCTGATGTAAGGCGAATGAATGTTGCCCTCACAAGGGCTAGGCTTTCCCTGTGGATTTTGGGCAATGCCAAAACGCTGAAGAGGAACAATGACTGGGCTGCTCTCATCAAGGATGCTACGGAGAGGAATTTGGTTATTTCTGTTACAAGACCTTACAAATCCATTTTTGACATGGCATCGAGAGAAAACTCCAAGCATAAGCATTTAGGTGGTTATCGGGAGACTGATAGTGAAAAGACTGGAAGAAGCCAGCATGTTAAGGAAACTGAGAGTAACCTTGAAATTAAATCTAAAAGGAAGTCCAAATATATTGACAATAGATCTCTAAACAAAGAGTCAAGGGATGAACTTACTAAATCTGCAGCAAGTGAATTCTTGCGTAGTGGCAAAAGAAAAACAAATGATATTGATACACAGAAGGAACCGTCTGGGAAGCAGCAAGTTTTGGAGGATACTCACAAGAGCAGTAAAAAGGTTCAGAAGTCAAAGAGTGCAGATCAATCTGTGCAAGTAAAAAGCAACGCCAGTACAATCTCTGATCCACCTCCCAAAGGTGGACATGAAAATCCCAATCGGCATCATAAAAGCCTGGAACATAGGGGTGGTTCAGCATCACGGGTTGACACTAAGCTACAGGGTAAAGGCACAGTTGACACAGGACAGCTTACTAATGATATAGAGAAACCCAAAGACTTGATTTCCAAAAGGAAACAACAACGAGAGGCTGTTGATGCCCTTCTTTCATCAGCCCTTATACCTTCAAAGAAGTCTGAGTTTCCATCAAAACCTTTGCCCCACAAAAGGCCTCTTTCACCATCATCAAATATGGGTGTTCGTTTAAGACCTACCAAGCAACAAAAAGAATCAAAAGCTGAAGCACGAGGCCAGAAGAAAGAGAAGTCCCCGAGTTCCCTTGGCTTTGGAAGGAAGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_58987.p1 GENE.R_Transcript_58987~~R_Transcript_58987.p1 ORF type:complete len:1709 (+),score=411.90,AAA_11|PF13086.2|9.6e+02,AAA_11|PF13086.2|8.5e-64,AAA_11|PF13086.2|1.6e+04,AAA_12|PF13087.2|6e-60,AAA_19|PF13245.2|6.1e-11,AAA_30|PF13604.2|0.025,AAA_30|PF13604.2|1.2e+04,AAA_30|PF13604.2|0.00014,Viral_helicase1|PF01443.14|2.6,Viral_helicase1|PF01443.14|2.6,Viral_helicase1|PF01443.14|5 R_Transcript_58987:1957-7083(+)
MMAEMVIRQKNSVSVSTMCIPLIRTFRRLGAHFVVQMEQGELQRQWTWEPEMGESLILLFSDPNDNVRQVGRRILEHVSNTRGLAPGLQFLCRFVSSLAAILAGLKHALKLVQLDSVLVNFQSLHHFFFVLCKVFKEGFSSTNHVLGKPSDDLNLKYTSQGGFLRQPTFDCFHADDGKALLRDEKKLWENFSIELANVAWASLKKCLHEGKAFIDYRISQMTCVRLLEILPIVLGKLSPSLDVKSSKMMQSLSDFSWLCDLMDWGKSSLEAVIRYWKQSVSSLLTLLKSSCDGNSAEIIRSVEKMISSNEIQMDSLTEQVSCLSVSLQTKGSYDKSNLKSKPFDGYRTKNLPVGVESSAHDDDADLQILDSPTNTNEIIKDSIILLSDEETEPSISPTGVIGDDAKPTEAKVLAPATVRKVSHHDREKKTSSEAKASQYMSEASQTRVAPKPAPPLGSMSQKSGVTKQALTSASLSKRKHSEVGEKNIMAKSIPNEHLSSVDKAIVKKSFEAAKTSTCKQTGSESNNAILKELVCDTEDPLELALKSAGRSHSSLTKQVSSLPKRRVIQLAAPVDNRSAYLRKLEAAARRFKPPNLDDWFRPILEMDYFSSVGLASAHEEEIKTPCDLKEVPVSFESSQQYEDIFRPLVLEEFKAQLRSSFQEVPSLEEMSCGSLSVVSVERIDDFHLVRCVHDELELAVSNSCMENDLVLLTKHPLAKSPHNVHIIGKVEKREKDNKRRQNMLLIRFYLQSGHSHLNRARKMLLERSKWFLSRIMSITPQLREFQALSSIDVIPALSVILKPAYHSHAFHERRKVGLGKLSQSMQQVLRSTFNESQIQAISTVIEAPDCRDDFELSLVQGPPGTGKTRTIVALISALLAASSRSNAMGNQSTSSMNVNCTPTTNSRACISQSAAVARAWQDAALARQLNNDMEKDKKVQKSSSRKRVLVCAQSNAAVDELVARLAGEGLYGVDGNMYKPYLVRVGNAKTVHQNSLPFFIDTLVEQRLAEEKMSAGNGGNELSEETSAMLRENLEKIVDRIKCYESKRANLKDGGSEKNCDYEHLEADKGKKLSNAELEARLRVLYQQKKEIYMRLATIQSREKKTNEEIRGLRNKLRRSILREAEIVVTTLSGCGGDLYAVCFESTFYCKGANLSEQNLFDAVVIDEAAQALEPATLIPLQLLKSSGAKCIMVGDPKQLPATVLSNVASRYLYECSMFERLQRAGHPVIMLREQYRMHPEISRFPSLHFYDGKLLDGAHLSSKTAPFHKTKGLGPYVFYDIRDGQEFFGKNSGSSSLYNEGEADAAIEIVRFLQKRYPFELAGGRIGIITPYKCQISLLRSRFSSVFGSSFCSEMEFNTVDGFQGREVDILILSTVRSSDRSSASARMNSTSIGFVADVRRMNVALTRARLSLWILGNAKTLKRNNDWAALIKDATERNLVISVTRPYKSIFDMASRENSKHKHLGGYRETDSEKTGRSQHVKETESNLEIKSKRKSKYIDNRSLNKESRDELTKSAASEFLRSGKRKTNDIDTQKEPSGKQQVLEDTHKSSKKVQKSKSADQSVQVKSNASTISDPPPKGGHENPNRHHKSLEHRGGSASRVDTKLQGKGTVDTGQLTNDIEKPKDLISKRKQQREAVDALLSSALIPSKKSEFPSKPLPHKRPLSPSSNMGVRLRPTKQQKESKAEARGQKKEKSPSSLGFGRKK*

Click here to download the sequence:
Link to NCBI Protein BLAST