Transcript Information: R_Transcript_59011.p1


Annotated TAIR IDAT5G46920.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19053668-19055875 | Forward length=735
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5326972312003
Replicate 22.1024712189527
Replicate 34.2465805827779
Condition 2: 8 Hour
Replicate 14.207990322463
Replicate 24.6900361101269
Replicate 36.8037836831491
Condition 3: 24 Hour
Replicate 17.0830582515785
Replicate 24.5662443981845
Replicate 37.1083208726054


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59011.p1 GENE.R_Transcript_59011~~R_Transcript_59011.p1 ORF type:complete len:739 (+),score=129.97,Intron_maturas2|PF01348.17|5.2e-08,RVT_1|PF00078.23|6.5e+03,RVT_1|PF00078.23|0.00023,RVT_1|PF00078.23|8.4 R_Transcript_59011:164-2380(+)
ATGCATAGAAATCTTGCTAGAATGGGTTACAAGTTCCTTAGTAGCAGTAGTGGTAACTCATTTTGTAAAACCCGTAAAACCCCATCATTTTTATGCACCCATTTGACTCACTTTAGCCCTAGGTCTAATGGGTTTGGTTCGGTTCGGGTTTTCTCGGTTTACAACAACAACCGACGAGCACCCGACCCAGATGACCCTTTAAGCTTAATGAAGGAAGATGGGGTTGCAGTTTGTTCACATATGTGGATTGAGAATTTTAGGGACCCTGAAAAGACTGTCACCAATTTAACTAGTTATCTTAGGAAGTTTGAATTGTGGGTTTTGGCTTACCAGAAGGTTTATGCTGATGATACTGGTTCTTATTTACCTCGTAATTCGATACAAAGGTCGGCTTTGGAGGATTTGTTGGCTCTTAGGAACGCGGTTCTTGATGATCGGTTTAAGTGGGGTGCTAGGCTGAACTTTTTTATCAAGTCTTCTAGGGATAAAACTGACTATGAATCGTTGTCTAAGAGGAAGATTAAGAATATATTGACTACCACGCAACCGACCCCTTTTCAAGATAGGATTGTTCAGGAGGTTCTGTTGATGGTTTTGGAGCCGGTGTATGAGGCTCGGTTTTCTCAGAAATCGTATGCGTTTAGGCCTGGCAGGACTCCTCATACTGTTTTGAGGGTTATTAGGAGGAGCTTTGCGGGGTACTTGTGGTATATAAGAGGTGATTTGAGTACCATTCTTGATGGCATGAAGGTGGGTATGATTGTAAATGCTTTAATGAGGGATGTTAGGGACAAGATGGTGATTGATTTGATAAGATCAGCGTTGGTGACGCCAGTGATTATGACAAAGATTGAGGATGAGAAAAAGAAGAAGAAGACGAAAAGGAAGTATCAGAAGAAGAGGGTGTTGGCGGAGGATGAACCGAAGCCTGATCCCTACTGGTTAAATACGTTTTTCGGGTTTGCTCCAGAGGAGGCAGAAAAGGTTCCGTCTTGGGGTCACTGTGGGATTCTTAGTCCTCTCTTGGCAAACATATGCCTGAATGAATTGGATCATTGGATGGAGGGTAAGATCAAGGAGTTTTATTGTCCCTCGAAAAGTGATGTCATATGGAATACACCTGAAGGTGAAGCAGAACAGGGGAATACTTCTTGGCCTGAGTTTGTTCCCACCAGTGGGCCTGACAAGACCCGCAAGATGGATTATATACGATATGGAGGTCATATTTTGATTGGAATTCGAGGGCCTAGAGCTGATGCGGCAATATTGAGAAAGCAATTAATTGAATTCTGTGATCAGAAATATCTCCTGAAGCTTGACAATGAGAGCTTACCCATTGAGCATATAACTAAGGGTATCATGTTTCTTGACCATGTGTTATGTCGAAGAGTTGTTTACCCCACACTGCGCTACACTGCCACTGGAGGTAAAATTATCAGTGAGAAGGGTGTAGGAACCCTTTTATCAGTTACAGCAAGTCTCAAACATTGTATTAAGCAATTCAGGAAGCTGAACTTTCTCAAGGGGGATCGAGACCCAGATCCACAGCCTTGTTTCAGAATGTTCCATGCTACACAAGCACATACAAATGCGCAGATGAATAAGCTTCTCTCCACTATGGTTGAGTGGTACAGGTATGCTGATAACAGGAAGAAGGTGGTCAATTTTTGTTCTTACATCATCAGAGGTTCACTTGCCAAACTTTATGCTGCAAAATATAAGCTTCGTTCACGTGCAAAGGTGTACAAGATTAGTGACAGGACCCTAAGTCGTCCTTTGAAGGAGAAAAAGGGTCTATCACCCGAGTATCAGAACATGTTGAGGATGGGACTTGCAGAGTCCATTGAAGGGCTGAAATATACCCGTATGTCTCTTGTGCCTGAGACTGATTACACCCCTTTCCCCAGTAATTGGAGGCCTGACCATGAAAAGGCATTACTTGAGTGTCTAAGGCTTGATGACCCAAAGACTTTGGAGGATCAGCGGAGCTGCATCAAAGATGAAGGTCTCATCTCACCTCAAGATTACGTTTCTATGCTTGTCTGGAACTACAAGAGAAATGCTATCATCACGGATCAGCTTTCACCAGTGGATAGTGGTGATGATTCTGAAGAAAATGAGGACACATTGCTTCTAGAGCCAAGCAATGAGAACAATGGCAGGAAAAGCGAAGATGAGGAAGAAAATACAGAAGGCGTTACTGTGGCACGCATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59011.p1 GENE.R_Transcript_59011~~R_Transcript_59011.p1 ORF type:complete len:739 (+),score=129.97,Intron_maturas2|PF01348.17|5.2e-08,RVT_1|PF00078.23|6.5e+03,RVT_1|PF00078.23|0.00023,RVT_1|PF00078.23|8.4 R_Transcript_59011:164-2380(+)
MHRNLARMGYKFLSSSSGNSFCKTRKTPSFLCTHLTHFSPRSNGFGSVRVFSVYNNNRRAPDPDDPLSLMKEDGVAVCSHMWIENFRDPEKTVTNLTSYLRKFELWVLAYQKVYADDTGSYLPRNSIQRSALEDLLALRNAVLDDRFKWGARLNFFIKSSRDKTDYESLSKRKIKNILTTTQPTPFQDRIVQEVLLMVLEPVYEARFSQKSYAFRPGRTPHTVLRVIRRSFAGYLWYIRGDLSTILDGMKVGMIVNALMRDVRDKMVIDLIRSALVTPVIMTKIEDEKKKKKTKRKYQKKRVLAEDEPKPDPYWLNTFFGFAPEEAEKVPSWGHCGILSPLLANICLNELDHWMEGKIKEFYCPSKSDVIWNTPEGEAEQGNTSWPEFVPTSGPDKTRKMDYIRYGGHILIGIRGPRADAAILRKQLIEFCDQKYLLKLDNESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKHCIKQFRKLNFLKGDRDPDPQPCFRMFHATQAHTNAQMNKLLSTMVEWYRYADNRKKVVNFCSYIIRGSLAKLYAAKYKLRSRAKVYKISDRTLSRPLKEKKGLSPEYQNMLRMGLAESIEGLKYTRMSLVPETDYTPFPSNWRPDHEKALLECLRLDDPKTLEDQRSCIKDEGLISPQDYVSMLVWNYKRNAIITDQLSPVDSGDDSEENEDTLLLEPSNENNGRKSEDEEENTEGVTVARM*

Click here to download the sequence:
Link to NCBI Protein BLAST