Transcript Information: R_Transcript_59078.p1


Annotated TAIR IDAT1G10870.1
Annotated Gene NameARF-GAP domain 4
Annotated Gene Symbol(s)AGD4
Annotation TypeOrtholog
Chromosome Positionchr1:3616905-3623612 | Reverse length=775
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.513395598651
Replicate 215.143111809197
Replicate 317.077529435495
Condition 2: 8 Hour
Replicate 113.871148557071
Replicate 217.356848181074
Replicate 317.896281059231
Condition 3: 24 Hour
Replicate 119.669732535245
Replicate 214.89153029952
Replicate 318.472998840604


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59078.p1 GENE.R_Transcript_59078~~R_Transcript_59078.p1 ORF type:complete len:782 (+),score=128.74,BAR_3|PF16746.1|3.7e-36,ArfGap|PF01412.14|2.5e-33,Ank_2|PF12796.3|3.1e-08,Ank_2|PF12796.3|5.8e-08,BAR|PF03114.14|6.5e-15,Ank_5|PF13857.2|9.7e-10,Ank_5|PF13857.2|2.6e-05,PH|PF00169.25|7.9e-12,Ank_3|PF13606.2|0.00035,Ank_3|PF13606.2|0.0091,Ank|PF00023.26|3e-05,Ank|PF00023.26|0.16,Ank_4|PF13637.2|5.1e+03,Ank_4|PF13637.2|1.1e-05 R_Transcript_59078:213-2558(+)
ATGACGGCCTTCACTGACCTCGAAGATTCCCCAATGTTTCACAATCAGGTTTTTTCACTTGAGCAAACAACTGATGAATTAAAAGATCGCTGTCAGAGGCTTTGCAAGGGAAGCAAGAAATTTGTAGATGCTCTTACTGAAGCATGCCACGGGGACACCACTTTTGCAGATGCCTTAGAATCCTTTGGTGGCGGACAGGATGATCCCTTGAGTTTATCAATAGGAGGTCCCCTAATATCCAAATTTATAAGCACATTTCGTGAGCTTGCTACTTATAAGGAACTTCTTCGTTCCCAGGTGGAGCATGTCTTAGTAGATCGTCTCACACAATTTATGTCTGCTGATCTGCAAGACGCAAAGGATTCCCGTCGGCGATTTGACAAATCGATACATGCCTATGATCAGGCACGTGAAAAATTTGCCTCACTAAAGAAGAGTACACGTGAGGACATTGTTGCTGGACAAGAAGAGGAACTTCATAACTCGAAGTCTGCATTTGAGAGAACTCGGTTTAGTCTGGTGAATGCCCTCATGAATGTTGAATCGAAAAAGAAATATGAGTTCTTAGAGTCCTTCAGTGCAATTATGGATGCTCACCTCAGATATTTTAAGCTGGGATATGACTTATTAAGCCAAATGGAGCCCTTGATTCATCAGGTCTTGACATATGCACAACAATCTAAGGAGGCTGCCAATGCTGAGCAAGACAAACTTGCTAGAAGAATCCAGGAGTTCAGGACTCAAGTGGAAATGGACAACTTACGTGCAGCAAGTAATACAGAGGCCTCAACTAGCATTTATACTACTCGCCCTGTTGGTATGGGTTGCTCTTATAAAGATGTCGAAGCAATTATGCAGTCTACTCCGAATGGCATGGTCCAAACCATCAAGCAAGGATACCTCTTAAAACATTCTTCGAGCTTGAGGGCTGATTGGAAGAGGCGGTTTTTTGTGCTTGACAGTCGTGGGGCACTGTACTATTACAGAATCAAGGGCCCAAAACCAGTGGGTTCTTATGCAAATCAATCGGGCGCTACAGGAGAACATGGTAATGGTGTGTTTGGGAGATTTCGAATTAGGCATAATAGGACATCATCATGGAATGGAGAAAGCCTAGGCTGTCGTACGCTTGATCTTCGGACATCAACAATAAAGATTGATGCAGACGACACGGATCTCCGACTTTGCTTTAGAATAATTTCTCCATCAAAATCATACACTTTGCAGGCTGAAAGTGAGGCTGATAGAAAGGAGTGGGTCAACAAAATTACTGGTGTTATCACGTCACTTTTGAATTCCCATTTATTAGAACAGGAGCCAACTAGTACTTTGAATGAAAAGCATAACAAGAACCTCACAAGTGAAGCTGTGTCAAATGTTCAATCATCAGAAAGTGGAAGATCGGTCAATGATATGCAAAATCAAAGAGATAGCGTCTCTAGGCTCCTAAGACAAATTCCTGGAAACGGACAGTGTGCTGAATGCAGTGCTCCTGAACCTGATTGGGCCTCTCTGAATCTTGGCATTTTGGTGTGCATTGAATGCTCTGGTGCCCATCGCAATCTTGGTGTTCACATTTCAAAGGTTCGGTCTATAACATTGGATGTCAAGGTCTGGGAGCCCACAATCTTAGAGTTATTTCAGGCACTTGGTAACGCTTATTGCAACAATGTGTGGGAGGAACTATTGTCAACAGATAATGAGAGAAAGGATGAGCCAGCGTGTACTTCTGCATCTATGTTGAAACCATCCAAATGGGATTCGTTTCATAAGAAGGAGAAATATGTTCAGATGAAGTATGCAGAAAAGCTGCTAATTAGCCAAAAAGCAACCGAACCTGGCCTCTCTTCACGAGCTAGTGCTCTGTGGGAAGCAGTCAGAACTGGTAACTTGCGAGAAGCATATCGTCTGATAGCAGTGTCAGATGCCTGTATTTTGAACACCACGTTTGATGACATACACAGTGCTGAGTCATCCAGCTCTCAAGCAGGGTTAGGCAAACATGATTTAGATCCAGCTGCATGCCCGATGTTTAAGGCTGGTGAGCCAGAAAATTGCTTACGAGGTTGTTCGTTATTGCACTTGGCATGCCATGTTGGCAATGCTGTGATGATTGAACTCTTGCTGCAATTTGGTGCTGATGTTAACATGCGTGACTTTCACGGAAGGACTCCATTGCACCACTGCGTTGCAAGAAGGGACAATCAGTTGGCAAAGTATCTTTTAAGAAGAGGTGCAAGAAGACTCATTAAGGATTGGGGCGGACTTACTGCGCTAGAGAGGGCAATGGATTTGGGATCAATTACAGACGAGGAACTCTTCATTTTGCTTGCTGAGAACGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59078.p1 GENE.R_Transcript_59078~~R_Transcript_59078.p1 ORF type:complete len:782 (+),score=128.74,BAR_3|PF16746.1|3.7e-36,ArfGap|PF01412.14|2.5e-33,Ank_2|PF12796.3|3.1e-08,Ank_2|PF12796.3|5.8e-08,BAR|PF03114.14|6.5e-15,Ank_5|PF13857.2|9.7e-10,Ank_5|PF13857.2|2.6e-05,PH|PF00169.25|7.9e-12,Ank_3|PF13606.2|0.00035,Ank_3|PF13606.2|0.0091,Ank|PF00023.26|3e-05,Ank|PF00023.26|0.16,Ank_4|PF13637.2|5.1e+03,Ank_4|PF13637.2|1.1e-05 R_Transcript_59078:213-2558(+)
MTAFTDLEDSPMFHNQVFSLEQTTDELKDRCQRLCKGSKKFVDALTEACHGDTTFADALESFGGGQDDPLSLSIGGPLISKFISTFRELATYKELLRSQVEHVLVDRLTQFMSADLQDAKDSRRRFDKSIHAYDQAREKFASLKKSTREDIVAGQEEELHNSKSAFERTRFSLVNALMNVESKKKYEFLESFSAIMDAHLRYFKLGYDLLSQMEPLIHQVLTYAQQSKEAANAEQDKLARRIQEFRTQVEMDNLRAASNTEASTSIYTTRPVGMGCSYKDVEAIMQSTPNGMVQTIKQGYLLKHSSSLRADWKRRFFVLDSRGALYYYRIKGPKPVGSYANQSGATGEHGNGVFGRFRIRHNRTSSWNGESLGCRTLDLRTSTIKIDADDTDLRLCFRIISPSKSYTLQAESEADRKEWVNKITGVITSLLNSHLLEQEPTSTLNEKHNKNLTSEAVSNVQSSESGRSVNDMQNQRDSVSRLLRQIPGNGQCAECSAPEPDWASLNLGILVCIECSGAHRNLGVHISKVRSITLDVKVWEPTILELFQALGNAYCNNVWEELLSTDNERKDEPACTSASMLKPSKWDSFHKKEKYVQMKYAEKLLISQKATEPGLSSRASALWEAVRTGNLREAYRLIAVSDACILNTTFDDIHSAESSSSQAGLGKHDLDPAACPMFKAGEPENCLRGCSLLHLACHVGNAVMIELLLQFGADVNMRDFHGRTPLHHCVARRDNQLAKYLLRRGARRLIKDWGGLTALERAMDLGSITDEELFILLAENE*

Click here to download the sequence:
Link to NCBI Protein BLAST