Transcript Information: R_Transcript_5909.p1


Annotated TAIR IDAT5G53570.2
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21760924-21763280 | Reverse length=577
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7785755786295
Replicate 21.8991628517254
Replicate 32.9928400879395
Condition 2: 8 Hour
Replicate 15.7830937312589
Replicate 26.966706905294
Replicate 39.2126264957743
Condition 3: 24 Hour
Replicate 15.9990250042242
Replicate 23.4357438472759
Replicate 35.9393771512184


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5909.p1 GENE.R_Transcript_5909~~R_Transcript_5909.p1 ORF type:3prime_partial len:199 (+),score=44.13 R_Transcript_5909:125-718(+)
ATGAAAAGCTGCGAAGACGAAGCCGGCAAATTCTTGGGCGCAGTATTTCAAGTCTTAAGGGGAGTGAAACCACTGAAAACTGTTAATAGCAATGGCTTTTTCAGTCAAGGTCTGGACACACCTGATTCGGATGACGTAAGCAGTCCAAGAGCTTCAAATGATGGAAATAGCGAGTCTGATTCAGATGGGCCCATCTGGGATCCAGAGATTTTACCCTCTGTGGCTCAGTTTGAAGAAGGTGAGAAGAGTGGGTTGACCTGTGATGTTGGATCTGGTGCCAGCACAGAATCATGTGATTCTGATTCATCCGAAGAAGATGAAAATACACCTTTCCTTACCACTGAAGAACTTGAAGGGGATGATCTGGATGAGGATACTAGTCTGCCCTCAAAAATGGATAGCGGGTTGAACTCGTGCTCGTCTGAAGATTTTGCTACATGGCAGAGGATCATCCGAATTGATGCGCTGCGGGCAAATTCCGAATGGATCATTTACACACCCTCCCAGGCTGCAGTGTCAGAAATCAAAGCTAGGCAGCAAGCAGAGAGAGTTGGGTTGAAGGATTATGATCATTTAGAACCATGCAGGATTTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5909.p1 GENE.R_Transcript_5909~~R_Transcript_5909.p1 ORF type:3prime_partial len:199 (+),score=44.13 R_Transcript_5909:125-718(+)
MKSCEDEAGKFLGAVFQVLRGVKPLKTVNSNGFFSQGLDTPDSDDVSSPRASNDGNSESDSDGPIWDPEILPSVAQFEEGEKSGLTCDVGSGASTESCDSDSSEEDENTPFLTTEELEGDDLDEDTSLPSKMDSGLNSCSSEDFATWQRIIRIDALRANSEWIIYTPSQAAVSEIKARQQAERVGLKDYDHLEPCRIY

Click here to download the sequence:
Link to NCBI Protein BLAST