Transcript Information: R_Transcript_59090.p1


Annotated TAIR IDAT5G01010.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038); Has 85 Blast hits to 85 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1388-4924 | Reverse length=479
E-Value4.2E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6549761388682
Replicate 25.0391120999115
Replicate 30
Condition 2: 8 Hour
Replicate 14.0067779004583
Replicate 26.261046915532
Replicate 30.33002928400704
Condition 3: 24 Hour
Replicate 13.0053856734449
Replicate 212.190543095883
Replicate 34.9346825112278


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59090.p1 GENE.R_Transcript_59090~~R_Transcript_59090.p1 ORF type:5prime_partial len:275 (+),score=39.88 R_Transcript_59090:3-827(+)
GTATTTAACACAGTCATGACCTATATGCCTCAAGATTTTCGGGGTACTCTAATTAGACAACAGAGAGAGCGCTCAGAGAGGAATAAACAAGCTGAAGTTGATGCTTTGGTCAAGTCTGGTGGCAGCATACGTGATCGATATGCTTTGTTATGGAATCAACAGATGGAAAGGAGGAGACAGTTGGCTCAGCTTGGCTCAGCAACAGGAGTGTATAAAACACTGGTGAAGTACCTAGTAGGAGTACCACAGGTTCTGCTGGACTTTATCAAACAGATAAATGATGACGATGGGCCTATGGAAGAGCAGAGACATCGATATGGACCACCTTTGTACAACCTTACCAAGATGGTGCTTACTATCCGGTTGTTTCTTTTTCTATCATGGGCACGCTTTGATACCAGAAAATTAACTAGACAACAATTAGATGTGTTGGAACAAGCAGTCAACATATATACTACGGAGTTTGAGAGGTTTATTAAGTTTCTTGGGGAGGTCTTTGCAAATGCTCCCTTCTTTATTTCGGAAGATGAAGTTGACAACGTAGAATCAAGGAGAAACGATGACTACAAAGAGATAAGCATCCCTGCTGGGAAAACCCATGAGGTGGTGTTATCTGTTGATTCCGTAAATTCATATATCGCCTGGGACTTTTCTTTGGACCAAAGTAAATTGAAATTGGATATTGGATTCAGCGTGGAATACATTAACTCCTCTGGTGAAAAAGTTCTTATCTTGCCTTATAGGCGTTGTGAATCTGACCAAGTGAGCTGTTCTGACTGTATCGATCTTCTTTCTCAATTATTTCTTGGCATGATTTTTCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59090.p1 GENE.R_Transcript_59090~~R_Transcript_59090.p1 ORF type:5prime_partial len:275 (+),score=39.88 R_Transcript_59090:3-827(+)
VFNTVMTYMPQDFRGTLIRQQRERSERNKQAEVDALVKSGGSIRDRYALLWNQQMERRRQLAQLGSATGVYKTLVKYLVGVPQVLLDFIKQINDDDGPMEEQRHRYGPPLYNLTKMVLTIRLFLFLSWARFDTRKLTRQQLDVLEQAVNIYTTEFERFIKFLGEVFANAPFFISEDEVDNVESRRNDDYKEISIPAGKTHEVVLSVDSVNSYIAWDFSLDQSKLKLDIGFSVEYINSSGEKVLILPYRRCESDQVSCSDCIDLLSQLFLGMIFL*

Click here to download the sequence:
Link to NCBI Protein BLAST