Transcript Information: R_Transcript_59095.p1


Annotated TAIR IDAT5G48850.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)ATSDI1
Annotation TypeOrtholog
Chromosome Positionchr5:19805576-19807699 | Reverse length=306
E-Value2.3E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.530113399664
Replicate 21.9748995441072
Replicate 31.9277947481911
Condition 2: 8 Hour
Replicate 13.6365145961255
Replicate 22.2139486971471
Replicate 31.8870486288521
Condition 3: 24 Hour
Replicate 12.1593977095365
Replicate 21.856135649207
Replicate 32.1670994739502


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59095.p1 GENE.R_Transcript_59095~~R_Transcript_59095.p1 ORF type:3prime_partial len:202 (+),score=35.37,TPR_1|PF00515.24|0.0012,TPR_1|PF00515.24|0.26,TPR_11|PF13414.2|4.4e-07,TPR_2|PF07719.13|0.28,TPR_2|PF07719.13|0.029,TPR_12|PF13424.2|0.21,TPR_12|PF13424.2|0.022,TPR_8|PF13181.2|1.3e+04,TPR_8|PF13181.2|0.013,TPR_8|PF13181.2|0.95 R_Transcript_59095:661-1263(+)
ATGGGTCAATATATATATGTTTGGATGGATCTTATTGGTCAGAAATGTGGAAGAGTAGATGAGCAAATTGAGCTACTAAGACAAAAGCTACGGATGATCTACCAAGGAGAAGCTTTCAATGGAAAACCAACAAAGACTGCAAGATCTCATGGCAAGAAATTTCAAGTTTCCATCAAACAAGAAACCTCTAGGATCCTGGGGAACTTGGGCTGGGCCTACATGCAAAAACCAAATTACATGGCAGCAGAAGTGGTCTACAGAAAGGCCCAAATGATCGATCCTGATGCCAACAAGGCCTGTAACTTGGGCTTATGTTTGATAAAACAGGCCCGTTACGAAGACGCCCGTTCAGTGCTTGAAGAAGTACTCAATTGCAAAGTTCCGGGCTCCGAGGATATCCGGGCACGTAATCGGGCCGAGGAACTGCTATTGGACTTGGAATCAAGGCAGCCCCCTCCTGTCCTATCCCATCTTGTGGGCCTCCGTTTGGATGATGAGTTTCTTGATGGGCTTGAGCAGCTTGGAGCCCATTGGGCCCCTATTAGACCGAGACGGCTTCCCATTTTCGAACAAATATCCAACTTCAAAGATCAATTAGCTTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59095.p1 GENE.R_Transcript_59095~~R_Transcript_59095.p1 ORF type:3prime_partial len:202 (+),score=35.37,TPR_1|PF00515.24|0.0012,TPR_1|PF00515.24|0.26,TPR_11|PF13414.2|4.4e-07,TPR_2|PF07719.13|0.28,TPR_2|PF07719.13|0.029,TPR_12|PF13424.2|0.21,TPR_12|PF13424.2|0.022,TPR_8|PF13181.2|1.3e+04,TPR_8|PF13181.2|0.013,TPR_8|PF13181.2|0.95 R_Transcript_59095:661-1263(+)
MGQYIYVWMDLIGQKCGRVDEQIELLRQKLRMIYQGEAFNGKPTKTARSHGKKFQVSIKQETSRILGNLGWAYMQKPNYMAAEVVYRKAQMIDPDANKACNLGLCLIKQARYEDARSVLEEVLNCKVPGSEDIRARNRAEELLLDLESRQPPPVLSHLVGLRLDDEFLDGLEQLGAHWAPIRPRRLPIFEQISNFKDQLAC

Click here to download the sequence:
Link to NCBI Protein BLAST