Transcript Information: R_Transcript_59100.p1


Annotated TAIR IDAT5G48850.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)ATSDI1
Annotation TypeOrtholog
Chromosome Positionchr5:19805576-19807699 | Reverse length=306
E-Value2.1E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0050457864058
Replicate 26.4288346551531
Replicate 35.8199528745925
Condition 2: 8 Hour
Replicate 16.7794740081949
Replicate 27.356511615504
Replicate 35.557822144353
Condition 3: 24 Hour
Replicate 17.328550841417
Replicate 29.1956779739215
Replicate 38.8406364207663


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59100.p1 GENE.R_Transcript_59100~~R_Transcript_59100.p1 ORF type:complete len:307 (+),score=62.77,TPR_1|PF00515.24|13,TPR_1|PF00515.24|2.5e+02,TPR_1|PF00515.24|0.0022,TPR_1|PF00515.24|0.46,TPR_11|PF13414.2|3,TPR_11|PF13414.2|9.5e-07,TPR_8|PF13181.2|4.5e+02,TPR_8|PF13181.2|45,TPR_8|PF13181.2|2.1e+02,TPR_8|PF13181.2|0.024,TPR_8|PF13181.2|1.7,TPR_12|PF13424.2|5.3,TPR_12|PF13424.2|3.6e+03,TPR_12|PF13424.2|0.39,TPR_12|PF13424.2|0.042,TPR_2|PF07719.13|6.8e+03,TPR_2|PF07719.13|54,TPR_2|PF07719.13|0.53,TPR_2|PF07719.13|0.053,TPR_19|PF14559.2|2.3,TPR_19|PF14559.2|3.5e+03,TPR_19|PF14559.2|0.0025,ANAPC3|PF12895.3|34,ANAPC3|PF12895.3|0.0013 R_Transcript_59100:175-1095(+)
ATGGAGAGTATTAGTATGAATTCAAAGAAGATAATGAGCAACAGCTACAACCCAGTTGGAGTTGTTGGAGAAACAGAGATGTTTCATGTCATTCACAAAGTCCCTTCTGGTGATGGCCCTTATGTTCGTGCCAAACATGCCCAGCTGGTTCAAAAGGATCCAGAAGCTGCAATAGTACTATTTTGGAAGGCGATAAATGCAGGGGATAGAGTAGATAGTGCTCTCAAAGACATGGCAGTGGTAATGAAGCAACTTGATAGGACTGAAGAAGCCATTGAAGCTATCAAGTCTTTTAGGGGTCGTTGCTCCAAAAATGCACAAGAGTCCCTCGATAACGTCCTCATTGATCTTTATAAGAAATGTGGAAGAGTAGATGAGCAAATTGAGCTACTAAGACAAAAGCTACGGATGATCTACCAAGGAGAAGCTTTCAATGGAAAACCAACAAAGACTGCAAGATCTCATGGCAAGAAATTTCAAGTTTCCATCAAACAAGAAACCTCTAGGATCCTGGGGAACTTGGGCTGGGCCTACATGCAAAAACCAAATTACATGGCAGCAGAAGTGGTCTACAGAAAGGCCCAAATGATCGATCCTGATGCCAACAAGGCCTGTAACTTGGGCTTATGCCTGATAAAGCAGGCCCGTTACGAAGACGCCCGTTCAGTGCTTGAAGAAGTACTCAATTGCAAAGTTCCGGGCTCCGAGGATATCCGGGCACGTAATCGGGCCGAGGAACTGCTATTGGACTTGGAATCAAGGCAGCCCCCTCCTGTCCTATCCCATCTTGTGGGCCTCCGTTTGGATGATGAGTTTCTTGATGGGCTTGAGCAGCTTGGAGCCCATTGGGCCCCTATTAGACCGAGACGGCTTCCCATTTTCGAACAAATATCCAACTTCAAAGATCAATTAGCTTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59100.p1 GENE.R_Transcript_59100~~R_Transcript_59100.p1 ORF type:complete len:307 (+),score=62.77,TPR_1|PF00515.24|13,TPR_1|PF00515.24|2.5e+02,TPR_1|PF00515.24|0.0022,TPR_1|PF00515.24|0.46,TPR_11|PF13414.2|3,TPR_11|PF13414.2|9.5e-07,TPR_8|PF13181.2|4.5e+02,TPR_8|PF13181.2|45,TPR_8|PF13181.2|2.1e+02,TPR_8|PF13181.2|0.024,TPR_8|PF13181.2|1.7,TPR_12|PF13424.2|5.3,TPR_12|PF13424.2|3.6e+03,TPR_12|PF13424.2|0.39,TPR_12|PF13424.2|0.042,TPR_2|PF07719.13|6.8e+03,TPR_2|PF07719.13|54,TPR_2|PF07719.13|0.53,TPR_2|PF07719.13|0.053,TPR_19|PF14559.2|2.3,TPR_19|PF14559.2|3.5e+03,TPR_19|PF14559.2|0.0025,ANAPC3|PF12895.3|34,ANAPC3|PF12895.3|0.0013 R_Transcript_59100:175-1095(+)
MESISMNSKKIMSNSYNPVGVVGETEMFHVIHKVPSGDGPYVRAKHAQLVQKDPEAAIVLFWKAINAGDRVDSALKDMAVVMKQLDRTEEAIEAIKSFRGRCSKNAQESLDNVLIDLYKKCGRVDEQIELLRQKLRMIYQGEAFNGKPTKTARSHGKKFQVSIKQETSRILGNLGWAYMQKPNYMAAEVVYRKAQMIDPDANKACNLGLCLIKQARYEDARSVLEEVLNCKVPGSEDIRARNRAEELLLDLESRQPPPVLSHLVGLRLDDEFLDGLEQLGAHWAPIRPRRLPIFEQISNFKDQLAC*

Click here to download the sequence:
Link to NCBI Protein BLAST