Transcript Information: R_Transcript_5912.p1


Annotated TAIR IDAT5G41940.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16782039-16785451 | Forward length=549
E-Value9E-164
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.402195791127
Replicate 214.289678141764
Replicate 321.07752443058
Condition 2: 8 Hour
Replicate 126.39674007017
Replicate 229.38163058624
Replicate 331.262937347999
Condition 3: 24 Hour
Replicate 126.457727022853
Replicate 223.496255841686
Replicate 325.780617680211


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5912.p1 GENE.R_Transcript_5912~~R_Transcript_5912.p1 ORF type:5prime_partial len:551 (+),score=120.90,RabGAP-TBC|PF00566.14|0.18,RabGAP-TBC|PF00566.14|6.1e-31 R_Transcript_5912:1-1653(+)
CAGAAACACTTGCTGAAATCTCTCCGGCGAAGTCACACTTCTACGCCATCCTCGTCGTCGTCTTCGTCTTCTCATCATAATCATAATCCGTCCTCGCCTTCTTCGTCTTCGTCGTCTTGGATTCACTTGAGATCGGTCCTCTTTGTTGTCACCTCGTCTTCATCTCCTGTCTCCACTGATCGTGGGAGTCTTAAATCTCCGTGGTCAAGGCGAAGGAGAAAACATGCCCTTCTACCCAAACAATGGAAACGTCTGTTCGGACCTGATGGAAGGCTTTCTAATGGTGGTGTTAAGTTTTTGAAGAAAGTTAGAAGTGGAGGTGTTGACCCCAGTATTAGAGCAGAGGTTTGGCCGTTTCTCCTTGGAGTATATGACTTGAACAGCAGCAGGGAGGAAAGAGAGACTGCTAGAAACCAGAAACGAAAGGAGTATGAAAAGCTGCGAAGACGAAGCCGGCAAATTCTTGGGCGCAGTATTTCAAGTCTTAAGGGGAGTGAAACCACTGAAAACAGCAATGTTAATAGCAATGGCTTTTTCAGTCAAGGTCTGGACACACCTGATTCGGATGTTGTAAGCAGTCCAAGAGCTTTAATTGATGGAAATAGCGAGTCTGATTCAGATGGGCCCATCTGGGATCCAGAGATTTTACCCTCTGTGGCTCAGTTTGAAGAAGGTGAGAAGAGTGGGTTGACCTGTGATGTTGGATCTGGTGCCAGCACAGAATCATGTGATTCTGATTCATCCGAAGAAGATGAAAATACACCTTTCCTTACCACTGAAGAACTTGAAGGGGATGATCTGGATGAGGATACTAGTCTGCCCTCAAAAATGGATAGCGGGTTGAACTCGTGCTCGTCTGAAGATTTTGCTACATGGCAGAGGATCATCCGAATTGATGCGCTGCGGGCAAATTCCGAATGGATCATTTACACACCCTCCCAGGCTGCAGTGTCAGAAATCAAAGCTAGGCAGCAAGCAGAGAGAGTTGGGTTGAAGGATTATGATCATTTAGAACCATGCAGGATTTACCACGCTGCTCGTCTAGTTGCCATCCTTAAAGCCTATGCTCTTTATGATCCTGAGACTGGCTACTGTCAAGGAATGAGCGATCTTCTCTCCCCCATCTTATCTGTTTTAGAGGATGACCATGAGGCATTCTGGTGCTTTGTTGGTTTCATGAGAAAAGCAAGGCACAACTTTCGGCTTGATGAGATTGGGATCAGAAGGCAGCTAGGTATCATATCCAAGATCATAAAGTGCAAGGATTCCCATCTTTATCGACATTTGGAGAATCTTCAAGCAGAGGACTGTTTCTTTGTGTACAGAATGGTGGTAGTCCTCTTTAGGAGAGAGTTGACTTTTGAACAGACACTTTGCCTGTGGGAGGTGATGTGGGCAGATCAGGCTGCTATCAGGGCCGGGATTAGTAAATCAGCATGGGGAAGGATGCGGCTGAGAGCTCCTCCCACTGAAGATCTACTTCTCTATGCTATTGCAGCATGTGTGCTGCAGAGAAGGAAACTCATAATTGAGAAGTACAGCAGCATGGATGAAATTCTTAGAGAGTGTAATAATATGGCTGGAAACTTGGATGTGTGGAAGCTTTTGGATGATGCTCATGACTTGGTGGTGACTTTGCATGACAAAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5912.p1 GENE.R_Transcript_5912~~R_Transcript_5912.p1 ORF type:5prime_partial len:551 (+),score=120.90,RabGAP-TBC|PF00566.14|0.18,RabGAP-TBC|PF00566.14|6.1e-31 R_Transcript_5912:1-1653(+)
QKHLLKSLRRSHTSTPSSSSSSSSHHNHNPSSPSSSSSSWIHLRSVLFVVTSSSSPVSTDRGSLKSPWSRRRRKHALLPKQWKRLFGPDGRLSNGGVKFLKKVRSGGVDPSIRAEVWPFLLGVYDLNSSREERETARNQKRKEYEKLRRRSRQILGRSISSLKGSETTENSNVNSNGFFSQGLDTPDSDVVSSPRALIDGNSESDSDGPIWDPEILPSVAQFEEGEKSGLTCDVGSGASTESCDSDSSEEDENTPFLTTEELEGDDLDEDTSLPSKMDSGLNSCSSEDFATWQRIIRIDALRANSEWIIYTPSQAAVSEIKARQQAERVGLKDYDHLEPCRIYHAARLVAILKAYALYDPETGYCQGMSDLLSPILSVLEDDHEAFWCFVGFMRKARHNFRLDEIGIRRQLGIISKIIKCKDSHLYRHLENLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRAGISKSAWGRMRLRAPPTEDLLLYAIAACVLQRRKLIIEKYSSMDEILRECNNMAGNLDVWKLLDDAHDLVVTLHDKI*

Click here to download the sequence:
Link to NCBI Protein BLAST