Transcript Information: R_Transcript_5917.p1


Annotated TAIR IDAT3G06620.1
Annotated Gene NamePAS domain-containing protein tyrosine kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2062833-2067138 | Reverse length=773
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.826352398322
Replicate 212.751679833982
Replicate 315.620955873816
Condition 2: 8 Hour
Replicate 118.396448271883
Replicate 223.092586089915
Replicate 326.372104435379
Condition 3: 24 Hour
Replicate 115.715881125771
Replicate 212.6442452802
Replicate 314.467658202727


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5917.p1 GENE.R_Transcript_5917~~R_Transcript_5917.p1 ORF type:complete len:764 (+),score=155.32,Pkinase_Tyr|PF07714.13|9.8e-70,Pkinase|PF00069.21|1.2e-59,PAS|PF00989.20|3.7e-14,PAS_9|PF13426.2|2.3e-13,PAS_4|PF08448.6|5.1e-11,PAS_3|PF08447.7|1.3e-06,PAS_3|PF08447.7|3.9e+03,PAS_8|PF13188.2|4.2e-06 R_Transcript_5917:78-2369(+)
ATGGGCAGTCCATCACCACCACCAGCAGAAGAGCTGCTGAAGAAGATCCAGGAGCTGGAAGCGGGCCATGCCCATCTCCAGGAGGAGATGACCCGGCTCATGGTTTCAGGCCGACCCAAGCCCAGGCCCGAGAGGAGGTCCCACTCCGTTTCCCCCCAGCGCCACAGGATCCCTCCCCCCAGGCCCGGAGGCGGGCCCGACAGTGGCTACAAGAAGGGGCTGTCCTTCGGGCATTCGTCCCCCCTGCAGAGGGAGAGCCGGTCCCACGAAGACCCGAAGAAGGTGCCGGGCCGGGCCCCCAGCCCGGTCCATAGAGGCCCGGCTGCCGTGAACTTCACGGACAGGCAGTACTTGAACATACTGCAGTCAATGGGGCAAGCCGTTCATATATATGACCTTGATCGCCGGCTTATTTATTGGAACCGATCTGCTGAAAGCCTTTATGGTTATTCTGCAGCAGAAGCTCTTGGTCAGAATGTTCTTGAACTGCTGGTTGATCATCAGGATTATGCCGCAGCTGATGATATTATTAGTCGTGTAAAAATGGGAGAGAAGTGGACAGGGCAGTTCCCTGTGAAAAATAAAATGGGAAGGAGGCTTTTAGTTATTGTAACCCTCACCCCATTCTATGATGATGATGATACTGTTGTTGGGATTATTTGTGTGTCGAGTGATACAAGACCATTTCAAGAAATGAAAGCGTCAATATCAGAAACACGGGAGCTCGAGGCGGCTCAAAGTCATAGCCAGCCCAGAAGCACTGTCGCATCCAAACTTGGGCTTGATCCTGAGCAGCCTTTGCAGACTGCTATTGCTTCAAAATTAACAAACTTGGCTACAAAGGTGGGCAACAAAGTTCGGTCTAAAATGAAGACTGCAGATAATAATGTATTTGGAGAAGGTGGGAGTGGAGATAGTCGACACTCTGATCATGGTTATTCTGATGCTGTGTTCTCAGACCATAAAGAGGATGGAAATTCCAGTGGTGCAAGTACTCCTAGAGGAGATGCAGTTGGTTCAGCTTTTGGTGTGTTTTCTCAGCTAACTGCAGGCAAATCCCCTGCCAAAGTGCAGGGAGAATCAGGTGATGAAAATGAAGGAAAAACTGCACTTCACAAGATGACGTCCAAAGCTGAGGCTTGGATTGGAAAAAAAGCAATGCAATGGTCATGGAAAGGGAATGAGCAGCAAAACTCTGATTTTAGGAACACTCGATTTGGTTGGTCATGGCCACACAGTGATCAGGACTCCGATCGTCTGAATCCTGCTGTAAAATCAGAGAGCCAAACAGGAGAATTTCATCGGCCTTCTGTAAATGAGACTTCTGGATCCTGGTCATCATTCAACGTTAACAGCACAAGCAGTGCAAGTAGTTGCGGAAGTACAAGCAGTGCTGTAAATAAGTTGGACATAGAAACTGATTGCTTAGACTATGAAATCTTGTGGGAAGACCTAACAATTGGAGAGCAAATTGGACAGGGTTCCTGTGGAACTGTGTACCATGGTCTCTGGTATGGATCGGATGTTGCTATTAAAGTTTTCTCCAAGCAAGAATATTCCGAGGATGCACTACTTTCATTCAGGCAGGAGGTTTCACTCATGAAGCGGCTTCGGCACCCTAACATTCTGCTATTTATGGGTGCGGTAACTTCACCTCAGCGTCTCTGCATTGTTACAGAGTTTCTTCCACGAGGAAGCTTGTTCCGTTTATTACAAAGGAGTACGTCCAAACTAGATTGGAGACGGCGAATTCACATGGCATTAGATATAGCACGAGGGATGAACTATCTCCATAACTGCAGCCCTCCTATCATACACCGTGATTTGAAATCTTCCAATCTTCTGGTTGATAAGAATTGGACAGTGAAGGTTGCAGATTTTGGCCTTTCACGTGTAAAACATGAGACTTATCTGACTACAAAGACTGGAAAAGGAACACCTCAATGGATGGCTCCAGAGGTGCTTCGGAATGAGCCCTCAGATGAAAAATCTGATATATACAGCTTTGGGGTGACACTTTGGGAACTTGCTACCCAAAAGATACCTTGGGAACATCTCAACTCAATGCAGGTGATCGGAGCAGTTGGGTTCATGAATCAAAGGTTAGATATGCCGAAGGATGTTGATCCAAGATGGGCTTCCATAATTGAGAGCTGCTGGCAAAGTGATCCTCAAAGCCGCCCAACATTCCAGGAATTGTTAGAAAAACTCAAGGATTTTCAGAGACAATATGCAATCCAGTTCCAAGCAGCCCGAGTTGCCTCTGCAGATGGTGCCCAGAAAGAACTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5917.p1 GENE.R_Transcript_5917~~R_Transcript_5917.p1 ORF type:complete len:764 (+),score=155.32,Pkinase_Tyr|PF07714.13|9.8e-70,Pkinase|PF00069.21|1.2e-59,PAS|PF00989.20|3.7e-14,PAS_9|PF13426.2|2.3e-13,PAS_4|PF08448.6|5.1e-11,PAS_3|PF08447.7|1.3e-06,PAS_3|PF08447.7|3.9e+03,PAS_8|PF13188.2|4.2e-06 R_Transcript_5917:78-2369(+)
MGSPSPPPAEELLKKIQELEAGHAHLQEEMTRLMVSGRPKPRPERRSHSVSPQRHRIPPPRPGGGPDSGYKKGLSFGHSSPLQRESRSHEDPKKVPGRAPSPVHRGPAAVNFTDRQYLNILQSMGQAVHIYDLDRRLIYWNRSAESLYGYSAAEALGQNVLELLVDHQDYAAADDIISRVKMGEKWTGQFPVKNKMGRRLLVIVTLTPFYDDDDTVVGIICVSSDTRPFQEMKASISETRELEAAQSHSQPRSTVASKLGLDPEQPLQTAIASKLTNLATKVGNKVRSKMKTADNNVFGEGGSGDSRHSDHGYSDAVFSDHKEDGNSSGASTPRGDAVGSAFGVFSQLTAGKSPAKVQGESGDENEGKTALHKMTSKAEAWIGKKAMQWSWKGNEQQNSDFRNTRFGWSWPHSDQDSDRLNPAVKSESQTGEFHRPSVNETSGSWSSFNVNSTSSASSCGSTSSAVNKLDIETDCLDYEILWEDLTIGEQIGQGSCGTVYHGLWYGSDVAIKVFSKQEYSEDALLSFRQEVSLMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRSTSKLDWRRRIHMALDIARGMNYLHNCSPPIIHRDLKSSNLLVDKNWTVKVADFGLSRVKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVTLWELATQKIPWEHLNSMQVIGAVGFMNQRLDMPKDVDPRWASIIESCWQSDPQSRPTFQELLEKLKDFQRQYAIQFQAARVASADGAQKEL*

Click here to download the sequence:
Link to NCBI Protein BLAST