Transcript Information: R_Transcript_59197.p2


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeOrtholog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value4.9E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4890401301889
Replicate 22.6245375520373
Replicate 33.3839498721589
Condition 2: 8 Hour
Replicate 10.27824846530961
Replicate 20.50820186002695
Replicate 32.2689513275484
Condition 3: 24 Hour
Replicate 10.26088417304209
Replicate 21.2531397096919
Replicate 30.99489566758624


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59197.p2 GENE.R_Transcript_59197~~R_Transcript_59197.p2 ORF type:5prime_partial len:88 (+),score=8.86 R_Transcript_59197:2-265(+)
CTCTGGCTAGTCTTCGGCTTCTTTTTGATGGCCACCAGTTTACGTATGTATGCAACATGTCAACAACTTCAAGCTCAGGCACAAGCACATGCTGTAGCCGCCACTGGCCTACTTCGTCACACTGAGCTCCGGTTGCATGTGCCTCCATCAATTGCATTTGCATCTAGAGGACGCCTCCAGGGCCTCAGGCTGCAGCTTGCGCTGCTAGACCGGGAATTCGATGATCTAGGTAAGGCACAACAACTTAGCCCTTGTCCTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59197.p2 GENE.R_Transcript_59197~~R_Transcript_59197.p2 ORF type:5prime_partial len:88 (+),score=8.86 R_Transcript_59197:2-265(+)
LWLVFGFFLMATSLRMYATCQQLQAQAQAHAVAATGLLRHTELRLHVPPSIAFASRGRLQGLRLQLALLDREFDDLGKAQQLSPCPF*

Click here to download the sequence:
Link to NCBI Protein BLAST