Transcript Information: R_Transcript_59198.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeOrtholog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value1.3E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2168640636479
Replicate 20
Replicate 30.16967953774928
Condition 2: 8 Hour
Replicate 10.544130332161
Replicate 20.16563616178656
Replicate 31.3445637496583
Condition 3: 24 Hour
Replicate 10.51017349394898
Replicate 20.3267445761567
Replicate 30.48639343748661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59198.p1 GENE.R_Transcript_59198~~R_Transcript_59198.p1 ORF type:5prime_partial len:135 (+),score=23.39 R_Transcript_59198:2-406(+)
CTCTGGCTAGTCTTCGGCTTCTTTTTGATGGCCACCAGTTTACGTATGTATGCAACATGTCAACAACTTCAAGCTCAGGCACAAGCACATGCTGTAGCCGCCACTGGCCTACTTCGTCACACTGAGCTCCGGTTGCATGTGCCTCCATCAATTGCATTTGCATCTAGAGGACGCCTCCAGGGCCTCAGGCTGCAGCTTGCGCTGCTAGACCGGGAATTCGATGATCTAGATTATGAAACTTTAAGAGCACTGGATGCTGACAATGTTCCTACAGTTCCCTCAATGAGTGATGAGGAGATAAATGCTCTACCAGTGCACAAGTATAAGGTTAGCAGTTCCCAAAGAAGCAGCAGGATACTTCCATCAACTTGGGAAGCTCTAAGGGGACCTCCGAAGATGAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59198.p1 GENE.R_Transcript_59198~~R_Transcript_59198.p1 ORF type:5prime_partial len:135 (+),score=23.39 R_Transcript_59198:2-406(+)
LWLVFGFFLMATSLRMYATCQQLQAQAQAHAVAATGLLRHTELRLHVPPSIAFASRGRLQGLRLQLALLDREFDDLDYETLRALDADNVPTVPSMSDEEINALPVHKYKVSSSQRSSRILPSTWEALRGPPKMN*

Click here to download the sequence:
Link to NCBI Protein BLAST