Transcript Information: R_Transcript_59199.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeOrtholog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value2.7E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6505921909438
Replicate 23.1494450624447
Replicate 32.2906737596152
Condition 2: 8 Hour
Replicate 14.1319897098476
Replicate 22.9348657416556
Replicate 34.0841123895871
Condition 3: 24 Hour
Replicate 14.3045888551945
Replicate 24.6867425142477
Replicate 34.2407427830864


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59199.p1 GENE.R_Transcript_59199~~R_Transcript_59199.p1 ORF type:5prime_partial len:160 (+),score=25.19 R_Transcript_59199:2-481(+)
CTCTGGCTAGTCTTCGGCTTCTTTTTGATGGCCACCAGTTTACGTATGTATGCAACATGTCAACAACTTCAAGCTCAGGCACAAGCACATGCTGTAGCCGCCACTGGCCTACTTCGTCACACTGAGCTCCGGTTGCATGTGCCTCCATCAATTGCATTTGCATCTAGAGGACGCCTCCAGGGCCTCAGGCTGCAGCTTGCGCTGCTAGACCGGGAATTCGATGATCTAGATTATGAAACTTTAAGAGCACTGGATGCTGACAATGTTCCTACAGTTCCCTCAATGAGTGATGAGGAGATAAATGCTCTACCAGTGCACAAGTATAAGGTTAGCAGTTCCCAAAGTGATGCAGGAGCAGTACAGCAGGCATCATCGTCATCAACATCTCCTCATGTAACTCGGCAGTACATTTTCGATTTTACACTACAATCTAGTTTATCATGTGCAAAACTGTCTTGTGAAACCCTATGCCTTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59199.p1 GENE.R_Transcript_59199~~R_Transcript_59199.p1 ORF type:5prime_partial len:160 (+),score=25.19 R_Transcript_59199:2-481(+)
LWLVFGFFLMATSLRMYATCQQLQAQAQAHAVAATGLLRHTELRLHVPPSIAFASRGRLQGLRLQLALLDREFDDLDYETLRALDADNVPTVPSMSDEEINALPVHKYKVSSSQSDAGAVQQASSSSTSPHVTRQYIFDFTLQSSLSCAKLSCETLCLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST