Transcript Information: R_Transcript_5920.p1


Annotated TAIR IDAT3G23940.1
Annotated Gene Namedehydratase family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8648780-8652323 | Forward length=608
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 171.539830838656
Replicate 265.799696304624
Replicate 363.658562706727
Condition 2: 8 Hour
Replicate 155.053702800742
Replicate 253.702182357299
Replicate 358.026600402592
Condition 3: 24 Hour
Replicate 197.348508389732
Replicate 280.430548954186
Replicate 387.833240743549


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5920.p1 GENE.R_Transcript_5920~~R_Transcript_5920.p1 ORF type:complete len:620 (+),score=153.37,ILVD_EDD|PF00920.17|2e-215 R_Transcript_5920:1086-2945(+)
ATGCAAGCTGCTCTTGTCATCCCGAATGTAGGTTCAAATTTTGCCTCCCCAGCCGTTTCAAAGCACCAAACTCCAAAGGTTCATTGCCACCGTCCTTTGAAGTGTGTTGCTACTTTAAAAGCTTCATCTGCAGTCTCAACTCAAACAGCCAATCCACCAGAGGCTGTAACATCAGAATCCACAGAGAAGCTCAACAAGTATAGCTCTCGCATTACGGAACCCAAGTCTCAAGGTGCTGCACAGGCTGTGCTCTACGGGGTTGGGCTTGGTGAAGATGATATGAGCAAACCTCAGGTTGGTATTTCATCGGTTTGGTATGAAGGTAATACTTGCAATATGCACCTGTTAAGTTTGGCAGAAGCAGTAAAAGAAGGAGTTCAAGAGGCTGGGATGATTGGCTTTAGGTTCAACACAATTGGTGTTAGTGATGCTATCTCTATGGGTACTAGAGGAATGTGTTACAGTTTGCAATCACGGGATCTCATTGCTGATAGTATTGAGACGGTCATGTCAGCTCAGTGGTATGATGGCAACATCTCTATTCCTGGATGTGATAAAAATATGCCAGGTACTATCATGGCTATGGGGCGCCTTAATAGACCAAGCATCATGATCTACGGTGGTACTATCAAGCCTGGTCATTTTCAAAATCAAACTCTTGACATTGTGAGCACATTCCAGTGTTATGGGGAGTTTGTTAGCGGAAAAATTGATGATGACCAGAGAATGAATGTCATTCGTAATTCCTGTCCTGGAGCAGGAGCTTGTGGTGGCATGTACACTGCAAATACCATGGCGTCTGCCATCGAGACAATGGGAATGTCACTACCTTATAGTTCGTCAACTCCAGCTGAAGACCCTTTGAAGTTGGATGAGTGCCGTCTTGCTGGAAAATACCTCCTGGATTTACTTAAAATGGATTTGAAGCCACGAGATATAATTAATGAAAAATCTTTACGGAATGCAATGGTCGTGGTCATGGCCCTTGGTGGTTCTACTAATGCTGTGTTGCATCTAATTGCAATTGCAAGGTCTGTTGGTGTGAACCTAACTCTAGATGACTTTCAAAAGGTCAGTGATGCAGTTCCATTCCTTGCAGATCTTAAGCCAAGTGGAAAATATGTCATGGAAGATGTACATAAGATTGGTGGTACTCCTGCTGTGATCCGCTACCTTCTTGAGCTTGGATTCTTGGACGGGGACTGTATGACTGTCACCGGAAAAACACTGGCTGAAAATGCCAAACTCTTCCCATCCTTGGCTGAAGGACAGCAAATAATACGGTCATTGTCAAACCCCATCAAAGAAACAGGCCATATCCAGATATTGTATGGTAATCTTGCTCCAGAAGGCTCTGTAGCAAAAATCACTGGAAAAGAAGGATTATATTTCTCTGGTCCTGCACTTGTTTTTGAAGGAGAAGAAGCAATGATTACAGCCATTTCAGAGAACCCTGAGAGTTTTAAGGGGAAGGTTGTAGTTATCAGAGGGGAAGGGCCCAAAGGTGGACCAGGTATGCCTGAAATGTTGACACCAACCAGTGCCATAATGGGAGCAGGTCTTGGAAAGGAAGTTGCTTTGTTGACTGATGGCAGATTTTCAGGAGGTTCACATGGATTTGTCATTGGTCATATTTGCCCTGAAGCACAGGAGGGTGGACCATTAGGTCTTGTTCGGAATGGGGACATCATCACAATTGATGTCGAGAAGAGAAGAATGGATGTTCAATTGAAAGATGAGGAGATGAAGGAGCGAAGAAGAAACTGGACTCCACCGCCATATAAGGCTAACAAAGGAGTTCTATACAAGTATATCAAGAACGTGCAGTCAGCTTCAAGGGGCTGTGTGACCGATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5920.p1 GENE.R_Transcript_5920~~R_Transcript_5920.p1 ORF type:complete len:620 (+),score=153.37,ILVD_EDD|PF00920.17|2e-215 R_Transcript_5920:1086-2945(+)
MQAALVIPNVGSNFASPAVSKHQTPKVHCHRPLKCVATLKASSAVSTQTANPPEAVTSESTEKLNKYSSRITEPKSQGAAQAVLYGVGLGEDDMSKPQVGISSVWYEGNTCNMHLLSLAEAVKEGVQEAGMIGFRFNTIGVSDAISMGTRGMCYSLQSRDLIADSIETVMSAQWYDGNISIPGCDKNMPGTIMAMGRLNRPSIMIYGGTIKPGHFQNQTLDIVSTFQCYGEFVSGKIDDDQRMNVIRNSCPGAGACGGMYTANTMASAIETMGMSLPYSSSTPAEDPLKLDECRLAGKYLLDLLKMDLKPRDIINEKSLRNAMVVVMALGGSTNAVLHLIAIARSVGVNLTLDDFQKVSDAVPFLADLKPSGKYVMEDVHKIGGTPAVIRYLLELGFLDGDCMTVTGKTLAENAKLFPSLAEGQQIIRSLSNPIKETGHIQILYGNLAPEGSVAKITGKEGLYFSGPALVFEGEEAMITAISENPESFKGKVVVIRGEGPKGGPGMPEMLTPTSAIMGAGLGKEVALLTDGRFSGGSHGFVIGHICPEAQEGGPLGLVRNGDIITIDVEKRRMDVQLKDEEMKERRRNWTPPPYKANKGVLYKYIKNVQSASRGCVTDE*

Click here to download the sequence:
Link to NCBI Protein BLAST