Transcript Information: R_Transcript_59205.p1


Annotated TAIR IDAT1G35625.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:13158466-13159260 | Reverse length=201
E-Value2.2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2681052978696
Replicate 23.6560722117932
Replicate 33.5328799277648
Condition 2: 8 Hour
Replicate 15.8473707336705
Replicate 23.4486932192873
Replicate 33.4316477789786
Condition 3: 24 Hour
Replicate 15.0255896418855
Replicate 23.6210126536769
Replicate 31.7423048506983


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59205.p1 GENE.R_Transcript_59205~~R_Transcript_59205.p1 ORF type:5prime_partial len:201 (+),score=31.32,zf-RING_2|PF13639.2|1.1e-11,zf-RING_11|PF17123.1|1.3e-08,zf-RING_11|PF17123.1|4.2e+03,zf-C3HC4|PF00097.21|4.7e-07,zf-C3HC4_2|PF13923.2|2.1e-06,zf-rbx1|PF12678.3|6.6e+03,zf-rbx1|PF12678.3|2.8e-06 R_Transcript_59205:2-604(+)
CTCTGGCTAGTCTTCGGCTTCTTTTTGATGGCCACCAGTTTACGTATGTATGCAACATGTCAACAACTTCAAGCTCAGGCACAAGCACATGCTGTAGCCGCCACTGGCCTACTTCGTCACACTGAGCTCCGGTTGCATGTGCCTCCATCAATTGCATTTGCATCTAGAGGACGCCTCCAGGGCCTCAGGCTGCAGCTTGCGCTGCTAGACCGGGAATTCGATGATCTAGTTCCCTCAATGAGTGATGAGGAGATAAATGCTCTACCAGTGCACAAGTATAAGGTTAGCAGTTCCCAAAGTGATGCAGGAGCAGTACAGCAGGCATCATCGTCATCAACGTCTCCTCAGAAGCAGCATGATATTTCCATCAACTTAGGAAGTTCTAAGGGGACCTCCGAAGATGAACTAACTTGTAGTGTTTGCTTGGAGCAAGTAGCTGTGGGCGAACTCATTCGTAGCTTGCCATGTTTACACAAGTACCATGCTAACTGCATTGATCCGTGGCTGAGACAGCAGGGAACATGCCCTGTGTGTAAATTCAAGGTCGGAGCTGGCTGGCATGAAGACGGTCAGGGTGGAGTTGATGCTTCGTTCATTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59205.p1 GENE.R_Transcript_59205~~R_Transcript_59205.p1 ORF type:5prime_partial len:201 (+),score=31.32,zf-RING_2|PF13639.2|1.1e-11,zf-RING_11|PF17123.1|1.3e-08,zf-RING_11|PF17123.1|4.2e+03,zf-C3HC4|PF00097.21|4.7e-07,zf-C3HC4_2|PF13923.2|2.1e-06,zf-rbx1|PF12678.3|6.6e+03,zf-rbx1|PF12678.3|2.8e-06 R_Transcript_59205:2-604(+)
LWLVFGFFLMATSLRMYATCQQLQAQAQAHAVAATGLLRHTELRLHVPPSIAFASRGRLQGLRLQLALLDREFDDLVPSMSDEEINALPVHKYKVSSSQSDAGAVQQASSSSTSPQKQHDISINLGSSKGTSEDELTCSVCLEQVAVGELIRSLPCLHKYHANCIDPWLRQQGTCPVCKFKVGAGWHEDGQGGVDASFIV*

Click here to download the sequence:
Link to NCBI Protein BLAST