Transcript Information: R_Transcript_59208.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeOrtholog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value1E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.978230139432
Replicate 26.9987668054327
Replicate 38.9635060158857
Condition 2: 8 Hour
Replicate 18.6942563943117
Replicate 28.7499102856813
Replicate 39.9965391822421
Condition 3: 24 Hour
Replicate 112.477069145491
Replicate 28.6303186963129
Replicate 39.8336064535336


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59208.p1 GENE.R_Transcript_59208~~R_Transcript_59208.p1 ORF type:3prime_partial len:138 (+),score=6.73 R_Transcript_59208:391-801(+)
ATGAGCTTTGTATTTCGAAACTCGCGAGCCGATATTGAGAATGCATTTCCTAGTATCATTCCCGAAAGGCGCATGAGGATCCATGCTGGGCGGCCTGTGAATACCAACTCGCTTGCCTTCCTCGTTACTGTGCTTTTGCTCTTCATGATACTAAATTCGCATCAAATGTCACCGAATTTCTTGCTCTGGCTAGTCTTCGGCTTCTTTTTGATGGCCACCAGTTTACGTATGTATGCAACATGTCAACAACTTCAAGCTCAGGCACAAGCACATGCTGTAGCCGCCACTGGCCTACTTCGTCACACTGAGCTCCGGTTGCATGTGCCTCCATCAATTGCATTTGCATCTAGAGGACGCCTCCAGGGCCTCAGGCTGCAGCTTGCGCTGCTAGACCGGGAATTCGATGATCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59208.p1 GENE.R_Transcript_59208~~R_Transcript_59208.p1 ORF type:3prime_partial len:138 (+),score=6.73 R_Transcript_59208:391-801(+)
MSFVFRNSRADIENAFPSIIPERRMRIHAGRPVNTNSLAFLVTVLLLFMILNSHQMSPNFLLWLVFGFFLMATSLRMYATCQQLQAQAQAHAVAATGLLRHTELRLHVPPSIAFASRGRLQGLRLQLALLDREFDDL

Click here to download the sequence:
Link to NCBI Protein BLAST