Transcript Information: R_Transcript_59215.p1


Annotated TAIR IDAT3G53320.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast hits to 5993 proteins in 551 species: Archae - 8; Bacteria - 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses - 112; Other Eukaryotes - 3198 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19769397-19772278 | Reverse length=553
E-Value7.5E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.152333393606
Replicate 20.76880392938465
Replicate 31.8221268542394
Condition 2: 8 Hour
Replicate 10.61832992291023
Replicate 21.4963721434127
Replicate 32.2460326272701
Condition 3: 24 Hour
Replicate 12.2899832967028
Replicate 22.1442612810284
Replicate 32.0450633167051


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59215.p1 GENE.R_Transcript_59215~~R_Transcript_59215.p1 ORF type:complete len:792 (+),score=198.28 R_Transcript_59215:67-2442(+)
ATGGAAGATCTCGGTGAAACGTCTCAGTTAGTCGATGAAAAAACTAATGATTTCTCTCTCATCGATGTTTCTGGTTCCGATGATGATTTCCTCTTGGCTTATTCTTCAGAGGTCAACATAGTGGATAATCCAGGTGATGCTCCTGCTCAAGGAGCACATACAAACAAACATTCTGATTCACAAAAACCAAAGAAAAATGGCAAGTGGAACCTGCGAAAAAGCTTGGCCTGGGATAGTGCCTTCTTTACCAGTGCAGGGGTTCTTGATCCTGAGGAGTTGTCTACCATAATTGAAGGAGCTGAAACCACAGCAACACAGAAGCCAACTTTACCTGGAATCCAAGAGGATTTAAGCAAATCAACTGATTCAATTTCCACATTTGAGAGTGATTTGACTCTGGAAAGCCTGGAGGCTGATCTTTTCTGTGATATAAGACCATCAATCCAGCGGTCCAGTAGGTCTTGCAACCCGGGAAATAGCAAAAGCACTAAAATACTTGAAGGAGACTCCACTAACAGATGCTTGCCGAAGATAATTGAATCTCCAACGGGCAATGTGCTGAAGCCTGAATTGGCCTCCAGGAAGCTTAATTCTGGTGTACAGGGACCCGGGAAATCATTAAAGCCAGCTGGTTCTATTTGCAAACAAGTGCCAAAGCCTGCTCTGAGGAACAAAGAGTTGAGCTCATTGCTTCCTCGACATCCTGCTGCAGCTGAAAAATCAAGTCTTGCTGGAGGTGCAGCAACCAAGAGGATGTCAGTTGGTGCTGGCCGTGTCAAATTAGAAAGTAGTGCTGCTGGAAATCCAAAGGGAAGAGGAGCTCCTTTGCCGAAAGTTTCCTATCAAGCTGACTCAAAGAAAACTGCACCAAAACCTGTGTCTGTGTCCAAATATTCTTCAGGCTCTACAATTTTGAGTAGATCAGCTATACGCAGTTCTCGTTCTTCATGTGACAGCCCTGGTAGTTCTTCATCTCAAAATATCTGTAAATCTCAAGCTGATAATATCAGAAAAAAGATGGACAATGTTGTCAATTTGCCATATGGTTCCAAAGCCAGAACTTCGTCCAGAGTTACTGCAAAGAGTAAATCTCAGACTCAGGACTCAAACATCTCAGAGTTTTTGAAGTTTGCATCAAAGCTCTCTCCCAGTGTTTCTCCGGCAAGCCCTATCAGTGAGTGGTCCACAGAATCATCCTCATCAACTGCTACATTTAATCAGCATCATGTTTCTTTGGAACCTTGCCCCGACACCTCGGAAGATGTTTCAGTGGATTGGACTTCTCAAGACTCTCAGAATCGTTTGAGAAGTAAAGGATTTGGTGGACATGAAAATAGAGTAGTGAGATTGCCGAGCCAATCTGCGAAGCCACCTTCAACAAGGATTGCTGCCCCTCTTGCTCGTCCAGGTTCTGCTAAACCATCGGGTCTTCGGATGCCATCAGCAAAAATTGGTTTCTTTGATGGGGTAAAACCTGGCACCAAGACACCGAGCAGCAATTCACGATCTCGTGCTGCTGAGCCTACTAACCCACCTAGGTTGGCAGCAGCATGCTGTAGCTCATTTGGGGCTGCAAACAAGACTAAACTTGGGAATACTAAGACCGCTGCTAAAGTGACTCCAACAGTATCTGGAATTGCCTCACCTGAACTCTACAGGACTGATGTTGATATCACATCAGCTGTACATCTACTTGACCAGTCAAGTTGTTTGCAAAAGGCTTCAAGTGCTTATAATATTTCCAGGTCTTCATGTGAACTACTGGAAGGGGCTAGGAACAACAGCAACTTAATTCCTTTGAAGAAAGAAGCAAGCACAGCAGGGAAATTGCACTCAACAAGTGACCAGGCAATATTTACTGCAGAAGAAGGATCCAAAGTCTTGGACATAACTGATTGCACAAGAGACCTCAGTGCTACTCCATCTTCTAAAACAATTGAAAGAAATATGAGTGAGTGGGTCAATGTTGACAATCTCAATCCACCTCAAGTAGTCAGTGAAGCTGATGATCTTAAAGATGTCAGCATTCATGCGTGCCAGGAGGTAAGTGGAAGTGCGAGGCATGAGAATCAAGATTCAAATCCTCAGACATTAGACCCAGTGCAAAATGTTTGTGTTGAAAATCAGGTAGGCGGGGAGGAGAAGCATGTGGGAGGTATAGACCATACCACAGAATTGCAGAGAGATCGAGATGGTGATTTTCAGTCTCAAAATGTTATTGAGCCCAGTCTGGTGTCAAGGACTCCTTTCACAGTAAAGAATTCTGTATGTGATGTGATTGACAGCTGCTACCCATCATCAGTTTCAGTAGTTGAACCATTGGTGAAAGCCGACACCCTACCTTCCCTGTTGGATGCTCAGAAGGAAAATACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59215.p1 GENE.R_Transcript_59215~~R_Transcript_59215.p1 ORF type:complete len:792 (+),score=198.28 R_Transcript_59215:67-2442(+)
MEDLGETSQLVDEKTNDFSLIDVSGSDDDFLLAYSSEVNIVDNPGDAPAQGAHTNKHSDSQKPKKNGKWNLRKSLAWDSAFFTSAGVLDPEELSTIIEGAETTATQKPTLPGIQEDLSKSTDSISTFESDLTLESLEADLFCDIRPSIQRSSRSCNPGNSKSTKILEGDSTNRCLPKIIESPTGNVLKPELASRKLNSGVQGPGKSLKPAGSICKQVPKPALRNKELSSLLPRHPAAAEKSSLAGGAATKRMSVGAGRVKLESSAAGNPKGRGAPLPKVSYQADSKKTAPKPVSVSKYSSGSTILSRSAIRSSRSSCDSPGSSSSQNICKSQADNIRKKMDNVVNLPYGSKARTSSRVTAKSKSQTQDSNISEFLKFASKLSPSVSPASPISEWSTESSSSTATFNQHHVSLEPCPDTSEDVSVDWTSQDSQNRLRSKGFGGHENRVVRLPSQSAKPPSTRIAAPLARPGSAKPSGLRMPSAKIGFFDGVKPGTKTPSSNSRSRAAEPTNPPRLAAACCSSFGAANKTKLGNTKTAAKVTPTVSGIASPELYRTDVDITSAVHLLDQSSCLQKASSAYNISRSSCELLEGARNNSNLIPLKKEASTAGKLHSTSDQAIFTAEEGSKVLDITDCTRDLSATPSSKTIERNMSEWVNVDNLNPPQVVSEADDLKDVSIHACQEVSGSARHENQDSNPQTLDPVQNVCVENQVGGEEKHVGGIDHTTELQRDRDGDFQSQNVIEPSLVSRTPFTVKNSVCDVIDSCYPSSVSVVEPLVKADTLPSLLDAQKENT*

Click here to download the sequence:
Link to NCBI Protein BLAST