Transcript Information: R_Transcript_59227.p1


Annotated TAIR IDAT1G15780.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5430446-5435921 | Reverse length=1335
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.105055306613
Replicate 216.70888792671
Replicate 322.7755921519
Condition 2: 8 Hour
Replicate 118.341034335484
Replicate 220.547260699486
Replicate 324.38689671136
Condition 3: 24 Hour
Replicate 124.294091808706
Replicate 219.424622095423
Replicate 322.973735835484


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59227.p1 GENE.R_Transcript_59227~~R_Transcript_59227.p1 ORF type:complete len:1048 (+),score=278.87 R_Transcript_59227:118-3144(+)
ATGTCACAGCAGTCAATGATGCCATCACAGCAGCAGCAGCAGCTAATGGGGCAGCAACCAAATTCTGTGAACGTGCAACAGAATCAGATGATCGGTCAGCAGAGTAACATGGCAGAAATGCAGCAACAACAGCAACAAAAGCAACAGAGGCTGTTGGGGCAGCAAAACAGTGTTCCGAATCTGCCGTCACAACCACAAACCACTCATCAGAACTTGCAGCAACAACATTTGATGGGTCAACAGAACAATCTTTCAAACATGCATCAGCAACAGCTGGGTCATCAAAGTCATGTTGGTGGACTTCCACAGCAGCAGCAACTGATTGGAACTCAATCTGGTAGTACTAGCATGCAGGCAAATCAACACTCATTTCACATGATGCAACAGTCCAAAGCTCCAGTGCAGCAACAGACCCAGGCTGCTTCTTCTTTGTTGTCAGGTGGTGGGCAACAGTCACAGTCGCAGTCACAACAGCAATTAATGTCACAACTCCAATCTCAACCTGCACAATTACAGCAGCAATTGGGTATGCAACAGCAGCCTAGTACTCTCCAACAGAGCATGCAGCAAAGAATTCAACCACCAAATTCATTACTTCAGCAGCAAAACATGATTGAACACCAAAAACAGTTATATCATCCTCAAAGACCAGAGGGACCATCCACTTCTCTGGACTCCACTGCTCAGACTGGTGTTACAAATGCTGGTGATTGGCAGGAAGAAGTGTATCAAAAGATAAAAACTATGAAGGATTTGTACTTTGCAGATCTTAATGAGATGTACCAGAAAATTTCTATGAAACTGCAACAGCATGACTCTCTTCCTCAACAACCGAAATCAGAGCAACTTGAAAAGCTTAAGCTATTCAAGCAAATGTTGGAGAGATGTATGCAGCTTCTACAGTGTACAAAGAGCAATATTCTGCCCAGTCACAGGGAAAAATTGCCATCATTTGAGAAGCAGATTGTTGGTATGCTCAATTCAAACAGGCCTCGGAAACCTGTTCCTTCTGTGCAACAAGGGCAAATTCTGCCTCCTCAAATTCATTCCATGCAGCAACCCCAGCAGTCTCATTCTCAAATTTCTCAAGCACAATCACATGACAACGGAGCCAATCCTCAATTGCAGTCTATGAATTTACAAGGTTCTGTTGCTACAATGCCGCAGACCAATGTTTCTAGCTTGCAGCATGGTTCTGTGCCTTCGTTATCTGCAATCACTTCATCACAACAGAGCATTGGGAACTCTCTACAGCCCACTTCTGCTTTGGATTCTGGACAGGGAAATGCACCGAGCTCAATGCAGCAAGTTGCAATGGCATCTCTGCAGCAGAATCCTGTCAGTGCTCCACAACAGGCAAACATCAGTTCGTTGCAACCACAAAGTGGAGTCAATTTGTTACAGCAGAACATGAATCCGCTTCAATCTAATTCAAATAAGCTTCAAAATCAGCACCTCAAACAGCAGGAGCAGATTTTGCAAAGCCAACAGTTGAAGCAGCAGATTCAAAATAGGCATATTCAACATCAACTAATGCAAAAGCAGCAGATGTTGCATCAGCAGCAACCGCAGCAGCAGTTACACCAACAAGCAAAGCAGCAACAGGCTACACAAATGCATGCACAACAAATGCCTCAACTTCACCAAATAAATGATGTAAATGAGTTAAAGATGAGACAGGGACTGGGTCTTAGATCAGGTGCTTTTCCCCAACATCTCACATCAGCCCAGCGGTATGCACATCAGCAGATGAAGCCTGGGGGTTCATTCCCCATTTCTTCCCCTCAACTGCTTCAGGCTGTGTCTCCGCAATTAAATCAACATTCTTCTCCACAGATTGACCAGCAAAATCTGCCACCATCTATTCCAAAAGGTGGAACCCCTTTGCAATCTGCAAACTCACCCTTTGTCCCATCTCCGTCAACTCCCTTAGCGCCATCTCCAATGCCTGGTGACTCTGAGAAACCTGCTGTTTCCTCACTCTCAAATGCTACAAATATTGGCCATCAACAAACGACTGGTCCACCTGCAGCACCTCAATCTCTTTCAATTGGGACTCCTGGGATATCACCCTCACCTTTCCTTGATTGTTCTGGACCAGATGGTGCTCATGGTAATTCCTCTACAGTTTCTGGGAAGTCCAATATCACGGAGCAACCTCTTGAGCGCTTGCTCAAAGCTGTCAAATCCATATCACCAAAAGCATTAAATGCATCAGTTAGTGATATTGGGTCAGTTGTCAGCATGATAGATCGAATTGCAGGATCTGCACCTGGTAATGGATCTAGAGCTACAGTTGGTGAAGATTTGGTTGCCATGACAAAATGCCGCTTGCAAGCTAGAAATTTTCTCACGCAAGATGGAAGTTCTGGGACAAAAAAAATGAGGCGGTATACCAGCGCAATGCCCTTAAATGTTGCATCATCTGTTGGCAGTATGAATGATAGCCTTAAGCAGTTCATGGGATCTGAGACATCGGAGCTAGAGTCAACTGCAACATCAAGCATTAAGAAAGCTAAGATTGAGGTCAATCACAACCTTATGGAAGAAATCAGAGAAATTAATGAGCGTCTTATTGATACTGTTGTTGACATCAGTGATGAAGATGCTGATCCATCTATAACTGCAGCAGGTGCTCGTAGTGAAGGAACCATTGTCAGGTGCTGTTTTAGTGCTATATCTCTGAGCCCGAACTTGAAATCTCAATATACATCAGCCCAGATGTCACCAATTCAGCCCTTAAGACTGCTAGTTCCAGCAAATTATCCAAATTGTTCCCCGATTTTGTTGGACAAGTTGCCGGTTGAAGTCAGTAAGGAGTATGAAGATCTTTCGGTGAAGGCAAAGTCAAGGTTCAGCTTATCTCTTCGCAATCTTTCCCAGCCAATGTCACTTCGGGAGATTGCAAGAACCTGGGATGATTGTGCCCGAGCTGTCATTTCTGAATACGCACAGCAAAATGGTGGCGGGACATTCAGCTCGAAATATGGTACTTGGGAAACTTGCTTAAGTATCACCAATTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59227.p1 GENE.R_Transcript_59227~~R_Transcript_59227.p1 ORF type:complete len:1048 (+),score=278.87 R_Transcript_59227:118-3144(+)
MSQQSMMPSQQQQQLMGQQPNSVNVQQNQMIGQQSNMAEMQQQQQQKQQRLLGQQNSVPNLPSQPQTTHQNLQQQHLMGQQNNLSNMHQQQLGHQSHVGGLPQQQQLIGTQSGSTSMQANQHSFHMMQQSKAPVQQQTQAASSLLSGGGQQSQSQSQQQLMSQLQSQPAQLQQQLGMQQQPSTLQQSMQQRIQPPNSLLQQQNMIEHQKQLYHPQRPEGPSTSLDSTAQTGVTNAGDWQEEVYQKIKTMKDLYFADLNEMYQKISMKLQQHDSLPQQPKSEQLEKLKLFKQMLERCMQLLQCTKSNILPSHREKLPSFEKQIVGMLNSNRPRKPVPSVQQGQILPPQIHSMQQPQQSHSQISQAQSHDNGANPQLQSMNLQGSVATMPQTNVSSLQHGSVPSLSAITSSQQSIGNSLQPTSALDSGQGNAPSSMQQVAMASLQQNPVSAPQQANISSLQPQSGVNLLQQNMNPLQSNSNKLQNQHLKQQEQILQSQQLKQQIQNRHIQHQLMQKQQMLHQQQPQQQLHQQAKQQQATQMHAQQMPQLHQINDVNELKMRQGLGLRSGAFPQHLTSAQRYAHQQMKPGGSFPISSPQLLQAVSPQLNQHSSPQIDQQNLPPSIPKGGTPLQSANSPFVPSPSTPLAPSPMPGDSEKPAVSSLSNATNIGHQQTTGPPAAPQSLSIGTPGISPSPFLDCSGPDGAHGNSSTVSGKSNITEQPLERLLKAVKSISPKALNASVSDIGSVVSMIDRIAGSAPGNGSRATVGEDLVAMTKCRLQARNFLTQDGSSGTKKMRRYTSAMPLNVASSVGSMNDSLKQFMGSETSELESTATSSIKKAKIEVNHNLMEEIREINERLIDTVVDISDEDADPSITAAGARSEGTIVRCCFSAISLSPNLKSQYTSAQMSPIQPLRLLVPANYPNCSPILLDKLPVEVSKEYEDLSVKAKSRFSLSLRNLSQPMSLREIARTWDDCARAVISEYAQQNGGGTFSSKYGTWETCLSITNS*

Click here to download the sequence:
Link to NCBI Protein BLAST