Transcript Information: R_Transcript_59246.p1


Annotated TAIR IDAT2G36390.1
Annotated Gene Namestarch branching enzyme 2.1
Annotated Gene Symbol(s)SBE2.1, BE3
Annotation TypeOrtholog
Chromosome Positionchr2:15264283-15269940 | Forward length=858
E-Value4.6E-296
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.402430351015
Replicate 29.167739467485
Replicate 311.558929800824
Condition 2: 8 Hour
Replicate 114.894627525513
Replicate 218.058730611372
Replicate 321.016553771301
Condition 3: 24 Hour
Replicate 117.377049940785
Replicate 212.044000822735
Replicate 318.306997238119


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59246.p1 GENE.R_Transcript_59246~~R_Transcript_59246.p1 ORF type:complete len:868 (+),score=175.73,Alpha-amylase_C|PF02806.14|1.3e+04,Alpha-amylase_C|PF02806.14|1.7e-25,CBM_48|PF02922.14|4.7e-20,Alpha-amylase|PF00128.20|9e-10 R_Transcript_59246:516-3119(+)
ATGAACAGCTCAGCAAGTATTACAGGTGTAATTTCTCTTGGGTCTTTGCTGCCTTCATCTACTAATCTCAAAAGGGGTTCAGCAAGCAACAACTCAATTTTGAGTCAACTGTATGCAGTGAACAGGAGTTCAGAAAAATTACCTAGGCATCTAATCTCTCATTCTAAGTCAAGAGTTAAAGTATCTAGGAGGGGGAAGCACTGTCCAGCTATCTCAGCCGTTTTGGCTGAGACCAATCAAGCAATGGCAAGTGATGAAGTGGATACTGAAACTCTGGGAATCCTGGGTGTGGATCCAGCCATAGAACCTTATGAAGATCATTTCAGATCCAGAGTTAAGAGATATGTAGATCAAAAAGAGCTCATTGAGAAATATGAAGGTGGTCTTGAAGAGTTTGCACAAGGATACCTAAAACTTGGTTTTAACAGAGAAGAAGACAGCATTGTGTATCGGGAATGGGCCCCTGCTGCTCAGGAAGCACAACTTATCGGGGACTTCAATGGATGGAATGGCGCCAACCATAGTATGGAAAAGAACCAGTTTGGTGTTTGGAGCATTAGGATTCAAGATACTGATGGAAAACCTGCTATACCTCACAACTCAAGAGTCAAGTTTCGGTTTAAGTATGGAGATGGAGTTTGGGTTGATCGTCTTCCTGCATGGATCAAATATGCCACAGTAGACCCAACAAGATTTGCAGCACCTTATGATGGTGTATACTGGGATCCCTCTCCTGAAGAAAGGTACCAATTTCAGCATCCTCGTCCTCCAAAACCAAAAGCTCCTAGAATATACGAGGCCCATGTTGGAATGAGTAGCTCAGAACCTCGTGTGAATACATATAGGGAATTTGCAGACTATGTTTTGCCTCGTATCAAGGCAAATAACTACAACACAGTGCAGTTGATGTCTGCGATGGAACATTCCTACTATGCTTCATTTGGGTACCATGTGACGAACTTCTTTGCTGTGAGCAGTAGATCTGGAAGTCCTGAGGACCTCAAATATCTTATTGACAAGGCTCACAGCTTAGGTTTACGAGTATTGATGGATGTTGTTCATAGTCATGCCAGTAACAACATCACTGATGGTCTTAATGGTTTTGATGTTGGCCAAAGTTCACAGGATTCCTATTTCCATACTGGAGAACATGGTTACCATAAGTTGTGGGATAGTAGATTGTTCAATTATGCCAACTGGGAAGTCCTTCGGTTCCTTTTATCCAATTTGAGGTGGTGGCTCGAAGAGTATAGATTTGATGGATTTCGTTTTGATGGAGTGACTTCCATGCTATATCATCATCATGGAATTAACATGGCCTTTACGGGGAATTATGATGAGTATTTCAGTGAGGCAACAGATGTTGATGCTGTGGTTTATCTGATGCTGGCCAATCGTTTAGTTCATAACATCTTTCCAGAAGCAACAGTGATTGCAGAAGATGTGTCTGGTATGCCAGGATTATGTCGCCCTGTTTCCGAGGGGGGAGTTGGCTTTGACTATCATCTGGCAATGGCTATTCCGGATAAGTGGATTGACTACTTGAAGAACAAGAAGGATGAAGAGTGGTCTATGAATGAAATTATGTGTAGTTTAACAAACAGAAGATACACTGAGAAGTGTGTGGCTTATGCAGAGAGTCATGACCAGGCCATTGTAGGTGACAAAACTGTAGCATTTTTCCTAATGGACCAAGAAATGTATACAGGAATGTCCTGCTTGACAGAAGCTTCTCCTGCAATTGAGAGAGGGATTGCTCTTCACAAGATGATACATTGTATTACAATGGCCCTGGGAGGAGAAGGCTACCTTAACTTCATGGGTAATGAGTTTGGGCATCCTGAGTGGATTGACTTTCCCAGAGAAGGAAATGGTTGGAGTTACGAAAAATGCAGACGCCAATGGGACCTGGTTGATACAGATCATCTGAGATATAAGTCCATGAATGCTTTTGATAGTGCCATGAATTTGCTGGATGAAAAGTTCTCGTTTCTCTCTTCAACAAAACAGATCGTCAGCAGTGCACATGATGAAGACAAGGTTATTGTGTTTGAACGAGGTGATTTAGTATTTGTCTTCAACTTCCATCCAGAGAATACATATGAGGGTTACAAAATTGGGTGTGACCTGCCTGGAAAGTATCGCGTTGCATTAGATAGTGATGCTTGGGCGTTTGGTGGAAGAGGAAGGGTGGGTCATGATGTTGATCATTTCACAACTCCTGAAGGAATACCAGGGGTTCCTGAGACGAATTTCAACAACCGACCTAATTCTTTTAAGGTCCTATCACCACCTCGTACATGTGTGGCGTACTATAGAGTTGAAGACTATCCTGAAGAAAACATGGGATCCACCATTGTTGCCGGTATTCTTGAAGAAGAGGTAGGAGAAAAAGAGGGTGGTGACTTAGAAAACCCTACTCCTGTGGAAGAGAAATCAGGTCCAAGCATTGAGGATATATCTGCGACTGAAGAGGTCAATGACAGCGAAACTCTTGATGATATCCAGAATTTTAATCCCTTCAGTTCTTGCAACTTTGAACTTGGTATACCTTTATTATCATCAATGTATTTCCCGTTAGTTCGCAGTTATCTTTTCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59246.p1 GENE.R_Transcript_59246~~R_Transcript_59246.p1 ORF type:complete len:868 (+),score=175.73,Alpha-amylase_C|PF02806.14|1.3e+04,Alpha-amylase_C|PF02806.14|1.7e-25,CBM_48|PF02922.14|4.7e-20,Alpha-amylase|PF00128.20|9e-10 R_Transcript_59246:516-3119(+)
MNSSASITGVISLGSLLPSSTNLKRGSASNNSILSQLYAVNRSSEKLPRHLISHSKSRVKVSRRGKHCPAISAVLAETNQAMASDEVDTETLGILGVDPAIEPYEDHFRSRVKRYVDQKELIEKYEGGLEEFAQGYLKLGFNREEDSIVYREWAPAAQEAQLIGDFNGWNGANHSMEKNQFGVWSIRIQDTDGKPAIPHNSRVKFRFKYGDGVWVDRLPAWIKYATVDPTRFAAPYDGVYWDPSPEERYQFQHPRPPKPKAPRIYEAHVGMSSSEPRVNTYREFADYVLPRIKANNYNTVQLMSAMEHSYYASFGYHVTNFFAVSSRSGSPEDLKYLIDKAHSLGLRVLMDVVHSHASNNITDGLNGFDVGQSSQDSYFHTGEHGYHKLWDSRLFNYANWEVLRFLLSNLRWWLEEYRFDGFRFDGVTSMLYHHHGINMAFTGNYDEYFSEATDVDAVVYLMLANRLVHNIFPEATVIAEDVSGMPGLCRPVSEGGVGFDYHLAMAIPDKWIDYLKNKKDEEWSMNEIMCSLTNRRYTEKCVAYAESHDQAIVGDKTVAFFLMDQEMYTGMSCLTEASPAIERGIALHKMIHCITMALGGEGYLNFMGNEFGHPEWIDFPREGNGWSYEKCRRQWDLVDTDHLRYKSMNAFDSAMNLLDEKFSFLSSTKQIVSSAHDEDKVIVFERGDLVFVFNFHPENTYEGYKIGCDLPGKYRVALDSDAWAFGGRGRVGHDVDHFTTPEGIPGVPETNFNNRPNSFKVLSPPRTCVAYYRVEDYPEENMGSTIVAGILEEEVGEKEGGDLENPTPVEEKSGPSIEDISATEEVNDSETLDDIQNFNPFSSCNFELGIPLLSSMYFPLVRSYLFM*

Click here to download the sequence:
Link to NCBI Protein BLAST