Transcript Information: R_Transcript_59292.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value6E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5330639692263
Replicate 24.0278617125143
Replicate 33.83337241405
Condition 2: 8 Hour
Replicate 14.3974614599134
Replicate 23.2856805970722
Replicate 33.1117046777806
Condition 3: 24 Hour
Replicate 12.9048654043217
Replicate 24.0509659186775
Replicate 33.4841652358735


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59292.p1 GENE.R_Transcript_59292~~R_Transcript_59292.p1 ORF type:complete len:245 (+),score=23.60,zf-RVT|PF13966.2|4.3e+03,zf-RVT|PF13966.2|1.5e-19 R_Transcript_59292:2514-3248(+)
ATGAACACACCATCACTCTGGAGAAAATGGTGCTCTAAATACTACCTGAAAGATAAATCTGTATGGGAGGTTCAGCCACGACAAGGGGATTCTTGGGCATGGAAAAGGTTACTTAAAGTTAGAGATGAGCTACTGACCCGTGTAAATCAGAGAGAACTTGCTGCTACCCTACACAGATGGGAACTACAAGAGAAGATAGTACCTGAGGCATACCAAATTTTCAGGGGGGAGGGGAGTAGAAAGCATTGGGCACGAACGGTCTGGGACAATGCCAATATGCCAAAACACTCAATTACTACTGTTCTGGCTGTTGCAAATGGATTGCCCACCCAAGACAACCTGATCAAGAGAGGCATGCACATGGCCAACCGATGTACCTTGTGCAGATGTCACCAGGAGTCTGTAGCTCACCTGTTTTTTGCCTGTTCCTTTGTACAGCAGGTCTGGCGAGCGATACTAAACTGGCTGAACATCTACAGACGTGGCTTGAGTCTCAAAGGCGAATTGAAATGGTTCACCAAGCATGTGAAGGGGAAGAGTTGGCCAAAGAAGCAGAGAAGATGTGCCCTGGTAGCGGTAGTCTACGAAATATGGCAGGAGAGGAACAAGAGGATCTTCCAAGGAAGGCAAAGAACTGATCAACAAATAATAGAGCAAGTTAAATTTCTAGTAGCTGTGAGAATGCTTAGAATAGAAACCATTGATTTTGTCACCATGATGAACTATTTGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59292.p1 GENE.R_Transcript_59292~~R_Transcript_59292.p1 ORF type:complete len:245 (+),score=23.60,zf-RVT|PF13966.2|4.3e+03,zf-RVT|PF13966.2|1.5e-19 R_Transcript_59292:2514-3248(+)
MNTPSLWRKWCSKYYLKDKSVWEVQPRQGDSWAWKRLLKVRDELLTRVNQRELAATLHRWELQEKIVPEAYQIFRGEGSRKHWARTVWDNANMPKHSITTVLAVANGLPTQDNLIKRGMHMANRCTLCRCHQESVAHLFFACSFVQQVWRAILNWLNIYRRGLSLKGELKWFTKHVKGKSWPKKQRRCALVAVVYEIWQERNKRIFQGRQRTDQQIIEQVKFLVAVRMLRIETIDFVTMMNYLL*

Click here to download the sequence:
Link to NCBI Protein BLAST