Transcript Information: R_Transcript_59331.p1


Annotated TAIR IDAT5G13120.1
Annotated Gene Namecyclophilin 20-2
Annotated Gene Symbol(s)ATCYP20-2, CYP20-2
Annotation TypeOrtholog
Chromosome Positionchr5:4162714-4164720 | Reverse length=259
E-Value1.8E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 157.889649629852
Replicate 241.992600832596
Replicate 355.598877660564
Condition 2: 8 Hour
Replicate 148.813245331725
Replicate 243.202092100931
Replicate 352.457567262154
Condition 3: 24 Hour
Replicate 170.062175455421
Replicate 257.529251345648
Replicate 365.025608098938


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59331.p1 GENE.R_Transcript_59331~~R_Transcript_59331.p1 ORF type:5prime_partial len:309 (+),score=49.84,Pro_isomerase|PF00160.17|1.8e-50 R_Transcript_59331:3-929(+)
CCATCTCTTGTTAATTGTTATCTCCGTCTCTCAGTCTCACTCACTCGTGACTACTCACTACCTGAAGCATACAATACAAAGACCCAACATCCCAATTCCTCCTTTACAGAGAGGAGAGAGAGAGGGATAACCCGAAAGCATATTCGTATCGAAGCTTTTTACCCAGCAATGGCTGCGTCATTCACAACCCTAGCGAATGTTGGTTCTATATCTGGCAATAGAGTCAAAGCTTTAACGATTTCGGTAAACCCTAATCCATGCTGTTCGTTGAAGGTTCCAAGTATACCTCTATCTTCTTCAAGCTCCTTCGGTCACGTGTCCCTCACGTGCTCATCTTCCTCTTCTCTTCGCTCTAAACCTCGTTTTCTTACCTCCATTCGAGCAGCTTCTGAGGAATCACCATTGCAATCAAAAGTTACGAGTAAAGTGTTTTTTGATATAAGCATTGGGAATCCAGTGGGTAAGCTGGCTGGTAGGATTGTAATTGGTTTGTATGGTGATGATGTGCCTCAAACTGCTGAGAATTTCCGAGCTCTTTGCACAGGTGAGAAGGGCTTTGGTTACAAAGGTTCCACATTCCATCGTGTCATTAAGGATTTCATGATTCAGGGAGGAGATTTTGATAAAGGAAATGGAACTGGGGGTAAAAGTATATATGGCCGTACATTTAAGGATGAAAACTTCAAATTATCTCATATTGGACCTGGAGTTGTGAGCATGGCGAATGCAGGTCCTAACACCAATGGAAGTCAGTTCTTTATATGCACCGTCAAGACTCCATGGCTAGATCAGAGGCATGTAGTCTTTGGGCAGGTTTTGGAGGGCATGGATATTGTTAAGCTGATTGAATCACAGGAGACAGACAGAGGTGACCGTCCTAGGAAGAAGGTTGTTATCAGTGATTGTGGCGAGCTTCCAACAGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59331.p1 GENE.R_Transcript_59331~~R_Transcript_59331.p1 ORF type:5prime_partial len:309 (+),score=49.84,Pro_isomerase|PF00160.17|1.8e-50 R_Transcript_59331:3-929(+)
PSLVNCYLRLSVSLTRDYSLPEAYNTKTQHPNSSFTERRERGITRKHIRIEAFYPAMAASFTTLANVGSISGNRVKALTISVNPNPCCSLKVPSIPLSSSSSFGHVSLTCSSSSSLRSKPRFLTSIRAASEESPLQSKVTSKVFFDISIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVKLIESQETDRGDRPRKKVVISDCGELPTV*

Click here to download the sequence:
Link to NCBI Protein BLAST