Transcript Information: R_Transcript_59344.p1


Annotated TAIR IDAT5G05850.1
Annotated Gene Nameplant intracellular ras group-related LRR 1
Annotated Gene Symbol(s)PIRL1
Annotation TypeOrtholog
Chromosome Positionchr5:1762691-1764609 | Reverse length=506
E-Value3.7E-188
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 159.092583855417
Replicate 249.216680050276
Replicate 356.875078860467
Condition 2: 8 Hour
Replicate 148.577591223307
Replicate 258.534219869985
Replicate 369.35595285335
Condition 3: 24 Hour
Replicate 167.302867466328
Replicate 265.588878551858
Replicate 360.554514978841


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59344.p1 GENE.R_Transcript_59344~~R_Transcript_59344.p1 ORF type:complete len:497 (+),score=100.24,LRR_8|PF13855.2|3.5e-06,LRR_8|PF13855.2|1.9e-08,LRR_8|PF13855.2|2.2e-07,LRR_8|PF13855.2|2.2e-08,LRR_4|PF12799.3|0.0073,LRR_4|PF12799.3|0.00071,LRR_4|PF12799.3|0.22,LRR_4|PF12799.3|1.7,LRR_4|PF12799.3|0.0063,LRR_4|PF12799.3|3.5e-05,LRR_4|PF12799.3|5.3e-06,LRR_1|PF00560.29|7.4e+03,LRR_1|PF00560.29|51,LRR_1|PF00560.29|2.1,LRR_1|PF00560.29|0.48,LRR_1|PF00560.29|1.9e+03,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|9.2,LRR_1|PF00560.29|84,LRR_1|PF00560.29|0.09,LRR_1|PF00560.29|1.4e+02 R_Transcript_59344:262-1752(+)
ATGGATCCAAACCCTACGAACTACCCAATCCTCTCCTACGTCATGTCAAGTATCCCATCCCTCAACTCACTTCGATCACCAAAATCCCCAATCTCCGACATCGAACAACCAAAAACACCACCACCGGTCACCACCGATCCCTTAATCGAGCGCATGCCACACCTCAAGGACCCGAAGGTCATGGCCGCCATGTCCGAGGCAGTTTCTGAGATCGCTCAAACTCGCTCCGTCCTCCAAGCCCTAGGCGAACCTCCCGATCACGAGACCATCGACATCGCAAAGGCGAAACTCGCCGAAATCGAGGCAGATCTCTCGCAACAGCTCGAAGAGATCGTTCTCTCTCCTAGCCGATCCGATGATACGGAGAGGAAGAAGAGAGAGAAAGCTGAGAGGGATAAGATGATGTATAAGGCCATTATTCAGCTTGATGAGATGCACGAGGCGTACCGGAAGTTGCTCCGAGGTGCTGAGGAGAAGTTGATGAAGATTTATGATAGGGCTGTTAGTGAGAATTGTGTTGATGAAGGTGAGAATGGTGACGTGGAAGTTGATGAGGAGGTTGTTAGGGTTTTGAAACAGGAGGAGGTTATCCAGAAAGTCGATTTGTCTGGCAGGAAGTTGAGGATTTTGCCTGAGGCTTTTGGGAAGGTTCGGTGTCTTGTTGCGGTTAATTTGTCCAGTAATCAGCTCCAGGCTATTCCTGACTCTATATGTGGATTGGAAAATCTTGAAGAGTTCAATTTATCCTCAAATTCTCTGCAGTCACTCCCAGACTCGATAGGTCTGCTGCTAAAATTGAAGATCCTCAATGTCTCTGGAAACAAGCTAAGTGCCCTTCCGGACAGCATCTGCCATTGCAGGTCTCTGGTAGAGTTGGACGCAAGTTTCAATAACCTTGGGTACTTGCCCACCAACATAGGCTATGAGTTGGTGGACTTGAGAAAACTTTCAGTTCAATATAACAAGATCCGCTCCCTTCCTACATCTATTGGAGAGATGAAATCTCTGCAGCATCTGGACGTGCATTTCAATGAGCTTCATGGTCTTCCCGTCACAATTGGCAAGTTGACAAGGCTCATGACTCTTAATCTGAGTGGCAATTTTAGTGATTTGAAGGAACTACCAGAGACATTTGGTGAATTAATAAATCTCGAAGAACTTGACCTGAGCAACAACCAGATCCATGCACTTCCATACTCATTTTGTAGGCTAGAGAAGTTGAGGAAATTCAACATAGAGCAAAACCCTATTGTTATTCCTCCCCTTGAGGTTGTGAACGATGGTGTGGAAACTGTGAGGATGTACATGGATAAGAAGTGGGCTGATTTCCTGGAGGAGGAAGAAAGGAGCAGGCAAGAGGTGCAAGAAGAGCAACCCGCTGGATGGTTAAAACGAAGTGTGTCAAAACTGGGTGAAGTCATCTCAAATGTCTCTGAATATCTGGGATCTCCTCGCACTCCACGAGACCCTTGCCTTGATGAAGTGCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59344.p1 GENE.R_Transcript_59344~~R_Transcript_59344.p1 ORF type:complete len:497 (+),score=100.24,LRR_8|PF13855.2|3.5e-06,LRR_8|PF13855.2|1.9e-08,LRR_8|PF13855.2|2.2e-07,LRR_8|PF13855.2|2.2e-08,LRR_4|PF12799.3|0.0073,LRR_4|PF12799.3|0.00071,LRR_4|PF12799.3|0.22,LRR_4|PF12799.3|1.7,LRR_4|PF12799.3|0.0063,LRR_4|PF12799.3|3.5e-05,LRR_4|PF12799.3|5.3e-06,LRR_1|PF00560.29|7.4e+03,LRR_1|PF00560.29|51,LRR_1|PF00560.29|2.1,LRR_1|PF00560.29|0.48,LRR_1|PF00560.29|1.9e+03,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|9.2,LRR_1|PF00560.29|84,LRR_1|PF00560.29|0.09,LRR_1|PF00560.29|1.4e+02 R_Transcript_59344:262-1752(+)
MDPNPTNYPILSYVMSSIPSLNSLRSPKSPISDIEQPKTPPPVTTDPLIERMPHLKDPKVMAAMSEAVSEIAQTRSVLQALGEPPDHETIDIAKAKLAEIEADLSQQLEEIVLSPSRSDDTERKKREKAERDKMMYKAIIQLDEMHEAYRKLLRGAEEKLMKIYDRAVSENCVDEGENGDVEVDEEVVRVLKQEEVIQKVDLSGRKLRILPEAFGKVRCLVAVNLSSNQLQAIPDSICGLENLEEFNLSSNSLQSLPDSIGLLLKLKILNVSGNKLSALPDSICHCRSLVELDASFNNLGYLPTNIGYELVDLRKLSVQYNKIRSLPTSIGEMKSLQHLDVHFNELHGLPVTIGKLTRLMTLNLSGNFSDLKELPETFGELINLEELDLSNNQIHALPYSFCRLEKLRKFNIEQNPIVIPPLEVVNDGVETVRMYMDKKWADFLEEEERSRQEVQEEQPAGWLKRSVSKLGEVISNVSEYLGSPRTPRDPCLDEVR*

Click here to download the sequence:
Link to NCBI Protein BLAST