Transcript Information: R_Transcript_59377.p1


Annotated TAIR IDAT5G04870.1
Annotated Gene Namecalcium dependent protein kinase 1
Annotated Gene Symbol(s)CPK1, ATCPK1
Annotation TypeOrtholog
Chromosome Positionchr5:1417015-1419877 | Reverse length=610
E-Value5e-324
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.121298427796
Replicate 222.745992117656
Replicate 326.07550296362
Condition 2: 8 Hour
Replicate 123.506430349355
Replicate 229.106414529943
Replicate 333.671237700818
Condition 3: 24 Hour
Replicate 133.518398552448
Replicate 227.458797318769
Replicate 329.001208710139


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59377.p1 GENE.R_Transcript_59377~~R_Transcript_59377.p1 ORF type:complete len:600 (+),score=135.83,Pkinase|PF00069.21|2e-73,EF-hand_1|PF00036.28|6.1e-08,EF-hand_1|PF00036.28|0.00014,EF-hand_1|PF00036.28|1.3e-06,EF-hand_1|PF00036.28|6.9e-09,EF-hand_6|PF13405.2|2.7e-06,EF-hand_6|PF13405.2|0.18,EF-hand_6|PF13405.2|1.8e-07,EF-hand_6|PF13405.2|0.0013,EF-hand_7|PF13499.2|2.5e-12,EF-hand_7|PF13499.2|4.8e-12,Pkinase_Tyr|PF07714.13|7.9e-25,EF-hand_8|PF13833.2|0.00027,EF-hand_8|PF13833.2|7.4e-07,EF-hand_8|PF13833.2|0.0073,EF-hand_8|PF13833.2|4.5e-09,EF-hand_5|PF13202.2|4.2e-05,EF-hand_5|PF13202.2|0.012,EF-hand_5|PF13202.2|6.5e-05,EF-hand_5|PF13202.2|0.0021,EF-hand_4|PF12763.3|69,EF-hand_4|PF12763.3|0.0089,EF-hand_4|PF12763.3|0.0018,EF-hand_9|PF14658.2|0.12,EF-hand_9|PF14658.2|0.15 R_Transcript_59377:947-2746(+)
ATGGGGAATACTTGTGTAGGACCTAGTATTTCAAGGCATGGTTTCTTGCAAACAGTTTCGGCTGTAGTGTGGCGAGGCCGGCCTGATGATGGTGCTTCTGTTTCCAATGGAAATGGAGAGAGTCGAGATGAGTCGAATTCACCATCTCCTAAAGAGCTAAACATGCCTTTGCCTACCCAAAGTGAACCCCCTAAACAAATCACAATGCCAAAACCGGAACCTGAGCAAACCCCAATGCCACAACCACAACCACAACCCCAAGTTGAGCAAGTGGTAATACCAAAAGCAGAGACTGAGCCGATGGAACAAGCAAAACCTAAGAAACCCCATGTTTTCAAGCGAGCACCGAGTGCAGGACTTAGGGTGGATTCTGTGTTGTTGAAGAGGACAGGAAACATTAAGGAGTTTTACACTTTGGGAAGGAAGTTAGGACAAGGGCAATTCGGAACTACATTCTTGTGTCTAGAGAAAGCCACTGGCAAAGAGTTTGCCTGTAAATCGATTGCCAAAAGGAAGTTGTTGACTGATGATGATGTGGAGGATGTGAGGAGGGAAATTCAGATAATGCATCACCTTGCAGGGCACCCGAATGTAATTTCGATCAAAGGGGCATACGAGGATGCTGTGGCTGTTCATCTTGTAATGGAACTTTGCAAAGGGGGTGAGCTTTTCGATAGGATCATTCAGCGTGGACATTACACAGAACGACAAGCAGCTGAGCTCACCCGGACTATAGTTGGTGTTGTGCAAACCTGTCATTCTTTGGGGGTTATGCACCGGGATTTGAAGCCAGAGAACTTCCTCTTTGTTGGCCAGGAGGAGGATTCGCCTCTCAAAGCTATTGATTTTGGACTATCAATATTTTTTAAACCAGGTGAGAAGTTTAATGATGTGGTTGGAAGCCCATATTATGTTGCACCTGAAGTACTACGAAAAAGATATGGTCCAGAAGCAGATGTTTGGAGTGCTGGAGTGATAGTTTACATTCTACTAAGTGGAGTACCTCCTTTCTGGGGTGAAACCGAGCAAGGAATCTTTGAACAAGTTCTGCATGGTGATCTGGACTTTATATCAGACCCTTGGCCCAGTATTTCACAAGATGCAAAGGATGTAGTGAGAGGAATGCTTGTTCGTGACCCTAAGAGGCGCCTTACTGCTCACCAAGTTCTACGCCACCCTTGGGTACAAATTGATGGTGTGGCACCTGACAAACCTCTTGATTCTGCTGTCTTGAGTCGTCTGAAGCAGTTCAGGGCCATGAACAAACTCAAGAAAATGGCTCTTAGAGTGATTGCAGATAGCCTATCCGAGGAAGAAATTGCAGGACTTAAAGAAATGTTCAAGATGATAGACACAGACAACAGTGGCCAAATCACTTATGAAGAACTTAAGGTTGGACTTGAAAAAGCTGGCGCAAAGCTCAAGGATTCTGAAATTTATGATCTAATGCAAGCAGCAGACGTTGATAACAGCGGAACAATTGATTATGGAGAGTTTGTAGCTGCAACATTGCATCTGAACAAAGTGGAAAAAGAAGATAATTTATTTGCAGCATTTAATTACTTTGACAAGGATGGAAGTGGTTACATTACTGCGGATGAGCTTCAGCAAGCTTGTGAGGAGTTCGGAATACAAGATGCGCGGTTGGAAGAAATGATTCGGGAAGCTGATCAAGACAATGACGGGCGTATTGACTACAACGAATTTGTCGCAATGATGCAAAAAGGGAATCCAGCTCCAGGTAAGAAAGGCCAAGAGAACAATTTGAATTTCGGATTGAGAGAAGCCCTAAAAATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59377.p1 GENE.R_Transcript_59377~~R_Transcript_59377.p1 ORF type:complete len:600 (+),score=135.83,Pkinase|PF00069.21|2e-73,EF-hand_1|PF00036.28|6.1e-08,EF-hand_1|PF00036.28|0.00014,EF-hand_1|PF00036.28|1.3e-06,EF-hand_1|PF00036.28|6.9e-09,EF-hand_6|PF13405.2|2.7e-06,EF-hand_6|PF13405.2|0.18,EF-hand_6|PF13405.2|1.8e-07,EF-hand_6|PF13405.2|0.0013,EF-hand_7|PF13499.2|2.5e-12,EF-hand_7|PF13499.2|4.8e-12,Pkinase_Tyr|PF07714.13|7.9e-25,EF-hand_8|PF13833.2|0.00027,EF-hand_8|PF13833.2|7.4e-07,EF-hand_8|PF13833.2|0.0073,EF-hand_8|PF13833.2|4.5e-09,EF-hand_5|PF13202.2|4.2e-05,EF-hand_5|PF13202.2|0.012,EF-hand_5|PF13202.2|6.5e-05,EF-hand_5|PF13202.2|0.0021,EF-hand_4|PF12763.3|69,EF-hand_4|PF12763.3|0.0089,EF-hand_4|PF12763.3|0.0018,EF-hand_9|PF14658.2|0.12,EF-hand_9|PF14658.2|0.15 R_Transcript_59377:947-2746(+)
MGNTCVGPSISRHGFLQTVSAVVWRGRPDDGASVSNGNGESRDESNSPSPKELNMPLPTQSEPPKQITMPKPEPEQTPMPQPQPQPQVEQVVIPKAETEPMEQAKPKKPHVFKRAPSAGLRVDSVLLKRTGNIKEFYTLGRKLGQGQFGTTFLCLEKATGKEFACKSIAKRKLLTDDDVEDVRREIQIMHHLAGHPNVISIKGAYEDAVAVHLVMELCKGGELFDRIIQRGHYTERQAAELTRTIVGVVQTCHSLGVMHRDLKPENFLFVGQEEDSPLKAIDFGLSIFFKPGEKFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVIVYILLSGVPPFWGETEQGIFEQVLHGDLDFISDPWPSISQDAKDVVRGMLVRDPKRRLTAHQVLRHPWVQIDGVAPDKPLDSAVLSRLKQFRAMNKLKKMALRVIADSLSEEEIAGLKEMFKMIDTDNSGQITYEELKVGLEKAGAKLKDSEIYDLMQAADVDNSGTIDYGEFVAATLHLNKVEKEDNLFAAFNYFDKDGSGYITADELQQACEEFGIQDARLEEMIREADQDNDGRIDYNEFVAMMQKGNPAPGKKGQENNLNFGLREALKI*

Click here to download the sequence:
Link to NCBI Protein BLAST