Transcript Information: R_Transcript_59438.p1


Annotated TAIR IDAT2G45660.1
Annotated Gene NameAGAMOUS-like 20
Annotated Gene Symbol(s)AGL20, SOC1, ATSOC1
Annotation TypeOrtholog
Chromosome Positionchr2:18807799-18810193 | Reverse length=214
E-Value2E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.590610488927
Replicate 228.092272316251
Replicate 331.602813905803
Condition 2: 8 Hour
Replicate 132.421098957927
Replicate 239.028020620958
Replicate 340.084806786688
Condition 3: 24 Hour
Replicate 129.547548191212
Replicate 231.142842414936
Replicate 334.250204556349


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59438.p1 GENE.R_Transcript_59438~~R_Transcript_59438.p1 ORF type:complete len:216 (+),score=47.94,K-box|PF01486.13|4.6e-27,SRF-TF|PF00319.14|4.9e-27 R_Transcript_59438:568-1215(+)
ATGGTGAGAGGAAAGACGCAAATGAAGAGGATAGAAAACGCGACGAGCAGACAAGTGACGTTCTCAAAGCGTAGAAATGGGTTGTTGAAGAAAGCCTTTGAACTTTCGGTGCTATGTGATGCTGAAGTTGCTCTCATTATCTTCTCTCCCCGAGGCAAGCTCTATGAATTCGCCAGTCGCAGCATGCAGGAAACAATAAGACGTTATCAGAGGGACACACAAGATGCACACCCGGCCAAGGACAATGCTGCTCAACAAAATATGCAGGACTTGAAAGAGGAAACTGCGAGTCTGATGAAGAGGATTGAAGAAATTGAAGCTTCAAAACGGAGACTTCTTGGAGAGAATTTAGCATCTTGCAGTTTAGAAGAGCTGCAACAGCTGGAGCAGCAGCTGGAGAGAAGTGTTGGCAAAATTAGAGCAAGAAAGAACCAAGTCTTCAATGAACAAATACGGCAATTGAAAGAAAAGGAAAAACAACTTGCTGCTGAGAATGTAAGGCTTGCTGAAACGTATGGATTGTTACCAAAGGAATCGGCAAGAGCAGACACAGCATCTGAGGACACTAATAGCCAAATTTCCGATGTGGAGACCGATTTATTCATTGGATTGCCGGAGACGAGAATTAAGCGTGTCACTAATGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59438.p1 GENE.R_Transcript_59438~~R_Transcript_59438.p1 ORF type:complete len:216 (+),score=47.94,K-box|PF01486.13|4.6e-27,SRF-TF|PF00319.14|4.9e-27 R_Transcript_59438:568-1215(+)
MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFASRSMQETIRRYQRDTQDAHPAKDNAAQQNMQDLKEETASLMKRIEEIEASKRRLLGENLASCSLEELQQLEQQLERSVGKIRARKNQVFNEQIRQLKEKEKQLAAENVRLAETYGLLPKESARADTASEDTNSQISDVETDLFIGLPETRIKRVTNG*

Click here to download the sequence:
Link to NCBI Protein BLAST