Transcript Information: R_Transcript_59477.p1


Annotated TAIR IDAT4G24690.1
Annotated Gene Nameubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:12741191-12744202 | Forward length=704
E-Value7E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6681240739821
Replicate 21.4915404667316
Replicate 31.5333745112179
Condition 2: 8 Hour
Replicate 11.5721798531701
Replicate 22.1077880424068
Replicate 33.2980385416823
Condition 3: 24 Hour
Replicate 11.5995193560286
Replicate 21.9885889163635
Replicate 32.6911112319956


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59477.p1 GENE.R_Transcript_59477~~R_Transcript_59477.p1 ORF type:complete len:732 (+),score=146.27,N_BRCA1_IG|PF16158.1|1.8e-31,PB1|PF00564.20|2.1e-11,ZZ|PF00569.13|9.7e-08 R_Transcript_59477:78-2198(+)
ATGGCTTCGTCTGTTGTCATCAAGGTGAAGCATGGAGACACACTTAGGCGGTTCAATACTGTCATTACAAGAGATAACAACTTGGATCTTAATATGGACGAACTGAGAATGAAGGTTCGCTCTCTTTTCAATTTCCCTGCTGATGCTAATTTTACTTTGACCTATATTGATGAGGATAATGATCGGGTGACACTGGCGGATGATGATGATTTACGTGATGTTGTGAGGCAAAGCTTGAATCCAGTCAGGATCACTGTTCATCACAATACAGAGAAGAGTCTTCCATCTTCTGCTTCCAGTATAAGCTCAGGTCCTAGCAGCTCCTCTCCACAGATTCTGGATCAAAATTTGAATTGTAATATTTCTGAAGTTCTGAAATCTGTGCCAGAGCCTCTCCGTGACGCTGTGTCTAGGCTGTCTCTTGAAGTAGCAGCTAAAGCTGCATCCACTTCTCCCAAATTAGCTGATATTGTTGAGAATTTAGCAAAATTTGGGCAGTCTTGCTTAAATGTCTCCAAGTCTTCATCCAATCCTGGTGCTAGGACAAACCATCATGATGAAGTTTGTGATAACCGTGAGCACACTTCAGTAGGGGAGAAACTTAATACCACTTCTAATGGATTGGAGTCAAATAACAGTGGTTTTCGACAGCCTGCTTCTGAAAGCACCCAAATGCCAGATGTAGTTGGAGCTGTAAAAGGAGTAGAACCTAGTAGACCTCCATTTCTTCCTTCCTTTACGGGACATGAAGGCAGGGGTGCAAAAATTGACGATTGTGCTGCAAAATCATGGGCCAATCAAAAAGCTAACCTTCTCAAAAATCAATTACCTAAGGGACACTGGGAGAAGAAGCTTCGCAATGCTCAACCAGAAGTTGCACCTTGTGGTGTGAGATCTCGTCCCATCATGGAGCTTAAGGCTTGCCATCCTGAACCGTCTGCAAACATTCCCCAATGCGGTGGAAACAAATGTGCTTCAATTTATAGTTTAGGTGATTGTCCCTTTACAGCGCTTCCACTACCGCCAAGGCATGACGAGGGGATCTATGTAGATCCTGTACAGGCTTTCCATCACAGTTATAGCAAGGATGATGGTATGGGTTCCATTTTCCACAGAGGTGTCCGCTGTGACGGCTGTGGGGTTCTTCCAATTACTGGGTCACGGTTCAAGTCTAAAGTAAAGCATGATTTTGATCTGTGCAGTATTTGCTTTGCACGAATGGGAAATGATGCAGATTACACTAGAATTGATTTCCCCATGCCATACAGGCATCCATGGTCGACTTACGCTTTCCATGATTCTAGGGGTGGTCACCTCAATCATATGAAATTTCCACATATTATGAGACCATATGGGCCGAAGCATCTCCGCTCTAGACTTGACAGTCGGTTCATAATGGATGTTAATGTCATGGATGGTACAATGATGGCTCCATCTACCCCTTTTACCAAGATCTGGCGTATGCGCAACAATGGTATCCTTTCGTGGTCCCGTGGATTACAACTTCATTATATAGGAGGAGATCGATTTAGCGCTTCTGATTCAGTTGAGATTGAGATTCCACTGGAAGGGGTAAATGTTGGCAAGGAACTTGATGTATCTGTCGACTTTGTTGCTCCTGAATTGCCTGGAAGATACATCTCATATTGGAGGATGGCAGATCCATCTGGACATAAGTTTGGGCAGCGCGTGTGGGTTCTAATCCAGGTTGATGCTACTCTGAGTGACTCCACATGTGAAAGCTTCCCCACTTTGAACTTGAATGTGCCACCTGAAGGTAGTGGGGTGTATGTTAAGCCGTCACTAGATGCTGAAGCCGGTGACCCCAATTCTGCTTCTGATGTTGACAAGTCCTCGGCTGCTAAGCAAAACCGTAGAATTGTGATTGAAGACCTCAATTTTCCAAATAATGATGACTTATTGGTTGCTAATGATGTGTCATCTGCCGCATCAACGACAGCTTCATCATCAGTCTCACCTCTTGTTGCTGTTCAAGCGCCACCTATCACTCTTTCAACATCATTCTTATGTCATATGCTGCTATTGCTGAAAATCCAATGTCCCTTTTTCCATCTTCAGTCTCAACTCGTATTGGTGCTGAGAGCCCAATGTCTTCCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59477.p1 GENE.R_Transcript_59477~~R_Transcript_59477.p1 ORF type:complete len:732 (+),score=146.27,N_BRCA1_IG|PF16158.1|1.8e-31,PB1|PF00564.20|2.1e-11,ZZ|PF00569.13|9.7e-08 R_Transcript_59477:78-2198(+)
MASSVVIKVKHGDTLRRFNTVITRDNNLDLNMDELRMKVRSLFNFPADANFTLTYIDEDNDRVTLADDDDLRDVVRQSLNPVRITVHHNTEKSLPSSASSISSGPSSSSPQILDQNLNCNISEVLKSVPEPLRDAVSRLSLEVAAKAASTSPKLADIVENLAKFGQSCLNVSKSSSNPGARTNHHDEVCDNREHTSVGEKLNTTSNGLESNNSGFRQPASESTQMPDVVGAVKGVEPSRPPFLPSFTGHEGRGAKIDDCAAKSWANQKANLLKNQLPKGHWEKKLRNAQPEVAPCGVRSRPIMELKACHPEPSANIPQCGGNKCASIYSLGDCPFTALPLPPRHDEGIYVDPVQAFHHSYSKDDGMGSIFHRGVRCDGCGVLPITGSRFKSKVKHDFDLCSICFARMGNDADYTRIDFPMPYRHPWSTYAFHDSRGGHLNHMKFPHIMRPYGPKHLRSRLDSRFIMDVNVMDGTMMAPSTPFTKIWRMRNNGILSWSRGLQLHYIGGDRFSASDSVEIEIPLEGVNVGKELDVSVDFVAPELPGRYISYWRMADPSGHKFGQRVWVLIQVDATLSDSTCESFPTLNLNVPPEGSGVYVKPSLDAEAGDPNSASDVDKSSAAKQNRRIVIEDLNFPNNDDLLVANDVSSAASTTASSSVSPLVAVQAPPITLSTSFLCHMLLLLKIQCPFFHLQSQLVLVLRAQCLP*

Click here to download the sequence:
Link to NCBI Protein BLAST