Transcript Information: R_Transcript_59481.p1


Annotated TAIR IDAT4G24690.1
Annotated Gene Nameubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12741191-12744202 | Forward length=704
E-Value1.9E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.616468502979
Replicate 214.076259896641
Replicate 315.485882221921
Condition 2: 8 Hour
Replicate 116.333091016554
Replicate 220.323501155993
Replicate 323.725727267592
Condition 3: 24 Hour
Replicate 116.114366378051
Replicate 213.644985815318
Replicate 315.609454186156


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_59481.p1 GENE.R_Transcript_59481~~R_Transcript_59481.p1 ORF type:complete len:889 (+),score=202.91,N_BRCA1_IG|PF16158.1|2.4e-31,PB1|PF00564.20|2.7e-11,ZZ|PF00569.13|1.2e-07 R_Transcript_59481:78-2669(+)
ATGGCTTCGTCTGTTGTCATCAAGGTGAAGCATGGAGACACACTTAGGCGGTTCAATACTGTCATTACAAGAGATAACAACTTGGATCTTAATATGGACGAACTGAGAATGAAGGTTCGCTCTCTTTTCAATTTCCCTGCTGATGCTAATTTTACTTTGACCTATATTGATGAGGATAATGATCGGGTGACACTGGCGGATGATGATGATTTACGTGATGTTGTGAGGCAAAGCTTGAATCCAGTCAGGATCACTGTTCATCACAATACAGAGAAGAGTCTTCCATCTTCTGCTTCCAGTATAAGCTCAGGTCCTAGCAGCTCCTCTCCACAGATTCTGGATCAAAATTTGAATTGTAATATTTCTGAAGTTCTGAAATCTGTGCCAGAGCCTCTCCGTGACGCTGTGTCTAGGCTGTCTCTTGAAGTAGCAGCTAAAGCTGCATCCACTTCTCCCAAATTAGCTGATATTGTTGAGAATTTAGCAAAATTTGGGCAGTCTTGCTTAAATGTCTCCAAGTCTTCATCCAATCCTGGTGCTAGGACAAACCATCATGATGAAGTTTGTGATAACCGTGAGCACACTTCAGTAGGGGAGAAACTTAATACCACTTCTAATGGATTGGAGTCAAATAACAGTGGTTTTCGACAGCCTGCTTCTGAAAGCACCCAAATGCCAGATGTAGTTGGAGCTGTAAAAGGAGTAGAACCTAGTAGACCTCCATTTCTTCCTTCCTTTACGGGACATGAAGGCAGGGGTGCAAAAATTGACGATTGTGCTGCAAAATCATGGGCCAATCAAAAAGCTAACCTTCTCAAAAATCAATTACCTAAGGGACACTGGGAGAAGAAGCTTCGCAATGCTCAACCAGAAGTTGCACCTTGTGGTGTGAGATCTCGTCCCATCATGGAGCTTAAGGCTTGCCATCCTGAACCGTCTGCAAACATTCCCCAATGCGGTGGAAACAAATGTGCTTCAATTTATAGTTTAGGTGATTGTCCCTTTACAGCGCTTCCACTACCGCCAAGGCATGACGAGGGGATCTATGTAGATCCTGTACAGGCTTTCCATCACAGTTATAGCAAGGATGATGGTATGGGTTCCATTTTCCACAGAGGTGTCCGCTGTGACGGCTGTGGGGTTCTTCCAATTACTGGGTCACGGTTCAAGTCTAAAGTAAAGCATGATTTTGATCTGTGCAGTATTTGCTTTGCACGAATGGGAAATGATGCAGATTACACTAGAATTGATTTCCCCATGCCATACAGGCATCCATGGTCGACTTACGCTTTCCATGATTCTAGGGGTGGTCACCTCAATCATATGAAATTTCCACATATTATGAGACCATATGGGCCGAAGCATCTCCGCTCTAGACTTGACAGTCGGTTCATAATGGATGTTAATGTCATGGATGGTACAATGATGGCTCCATCTACCCCTTTTACCAAGATCTGGCGTATGCGCAACAATGGTATCCTTTCGTGGTCCCGTGGATTACAACTTCATTATATAGGAGGAGATCGATTTAGCGCTTCTGATTCAGTTGAGATTGAGATTCCACTGGAAGGGGTAAATGTTGGCAAGGAACTTGATGTATCTGTCGACTTTGTTGCTCCTGAATTGCCTGGAAGATACATCTCATATTGGAGGATGGCAGATCCATCTGGACATAAGTTTGGGCAGCGCGTGTGGGTTCTAATCCAGGTTGATGCTACTCTGAGTGACTCCACATGTGAAAGCTTCCCCACTTTGAACTTGAATGTGCCACCTGAAGGTACTGGGGTGCATCCAGTTCTAGATGTGAATGTTAAGTCGTCACTAGATGCTGAAGCCGGTGACCCCAATTCTGCTTCTGATGTTGACAAGTCCTCGGCTGCTAAGCAAAACCGTAGAGTTGAGATTGAAGACCTCAATTTTCCAATTAATGATGACTTATTGGTTGCTAATGATGTGTCATGTGCCGCATCTACGACAGCGTCGTCATCAGTCTCGCCTCCTGCTGGTGTTGAAAACCCACCTGTCACTCTTTCAGCATCATTCTTATCTCATATTGCTGCTACTGCTGAAAAGCCGGTGTGTCTTCTTCCATCTTCAGTCTCACCTCGTATTGGCGCCGAGAGCCCAATGTCTTCCACAGTATCTACTGTTGCAATCCCTCCGGTCACATTTACCTCATACCCTGCTGTTGATATTGATGTCCCCTGCAATCCGATGTCTGCCCCAACAACTTTATACCCTCTTGTCAATATGCCCATCGAAACATCTGCCTCATCTTCTAACAGCAAGGAAGATCAAAAGAGCCTAGAGCAAGACAAAGCGAAAATTGAAGTTGAGGAGAGCATGCTGAAGGAACTCGAAGATATGGGATTTAAGCAAGCTGAACTGAACAAGGAGATTTTGCGGATGAATGAGTATGATTTGGAGCGATCTCTGGATGATCTCTGTGGTGTTTCTGGGTGGGATCCAATCCTCGAGGAGCTGAAGGAGATGGGTTTCCATGACAAAGAGACAAATCAGAAGCTGCTCGTGAAGAACAATGGAAGCATCATGCGTGTGGTTATGGATCTTATTGCTGGGGACAAGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_59481.p1 GENE.R_Transcript_59481~~R_Transcript_59481.p1 ORF type:complete len:889 (+),score=202.91,N_BRCA1_IG|PF16158.1|2.4e-31,PB1|PF00564.20|2.7e-11,ZZ|PF00569.13|1.2e-07 R_Transcript_59481:78-2669(+)
MASSVVIKVKHGDTLRRFNTVITRDNNLDLNMDELRMKVRSLFNFPADANFTLTYIDEDNDRVTLADDDDLRDVVRQSLNPVRITVHHNTEKSLPSSASSISSGPSSSSPQILDQNLNCNISEVLKSVPEPLRDAVSRLSLEVAAKAASTSPKLADIVENLAKFGQSCLNVSKSSSNPGARTNHHDEVCDNREHTSVGEKLNTTSNGLESNNSGFRQPASESTQMPDVVGAVKGVEPSRPPFLPSFTGHEGRGAKIDDCAAKSWANQKANLLKNQLPKGHWEKKLRNAQPEVAPCGVRSRPIMELKACHPEPSANIPQCGGNKCASIYSLGDCPFTALPLPPRHDEGIYVDPVQAFHHSYSKDDGMGSIFHRGVRCDGCGVLPITGSRFKSKVKHDFDLCSICFARMGNDADYTRIDFPMPYRHPWSTYAFHDSRGGHLNHMKFPHIMRPYGPKHLRSRLDSRFIMDVNVMDGTMMAPSTPFTKIWRMRNNGILSWSRGLQLHYIGGDRFSASDSVEIEIPLEGVNVGKELDVSVDFVAPELPGRYISYWRMADPSGHKFGQRVWVLIQVDATLSDSTCESFPTLNLNVPPEGTGVHPVLDVNVKSSLDAEAGDPNSASDVDKSSAAKQNRRVEIEDLNFPINDDLLVANDVSCAASTTASSSVSPPAGVENPPVTLSASFLSHIAATAEKPVCLLPSSVSPRIGAESPMSSTVSTVAIPPVTFTSYPAVDIDVPCNPMSAPTTLYPLVNMPIETSASSSNSKEDQKSLEQDKAKIEVEESMLKELEDMGFKQAELNKEILRMNEYDLERSLDDLCGVSGWDPILEELKEMGFHDKETNQKLLVKNNGSIMRVVMDLIAGDKA*

Click here to download the sequence:
Link to NCBI Protein BLAST