Transcript Information: R_Transcript_5952.p1


Annotated TAIR IDAT2G35190.1
Annotated Gene Namenovel plant snare 11
Annotated Gene Symbol(s)NPSN11, ATNPSN11, NSPN11
Annotation TypeOrtholog
Chromosome Positionchr2:14831087-14832979 | Forward length=265
E-Value9.8E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.801733205648
Replicate 221.076438967505
Replicate 325.442216185039
Condition 2: 8 Hour
Replicate 115.420487466777
Replicate 215.106397274389
Replicate 317.874486794121
Condition 3: 24 Hour
Replicate 126.725691620037
Replicate 229.631492860623
Replicate 325.647043278158


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_5952.p1 GENE.R_Transcript_5952~~R_Transcript_5952.p1 ORF type:complete len:262 (+),score=57.24,Sec20|PF03908.9|16,Sec20|PF03908.9|1.8e-07,V-SNARE_C|PF12352.4|6.7e+02,V-SNARE_C|PF12352.4|6.3e-06 R_Transcript_5952:404-1189(+)
ATGTCGTCGTTATCGACGATCAGCGAAGAGCTTGGAGAGCTCGATGGACAAATTAGCGACGTATTTCGAGCTTTATCGAATGGGTTTCAGAAGCTGGAGAAGATCAAAGATCCGAGTAGACAGAGCAGACAATTGGAAGAGCTCACTGATAAGATGCGGGATTGTAAGAGGCTAATCAAAGATTTTGATAGAGAGGTCAAGGCTATGGAGGGCAGGAATGATGCCAATACCAACAAGATGCTGAGTGAGAAAAAGCAGTCAATGGTAAAAGAGCTGAATTCATATGTTGCTTTGAAAAAACAATATGCAACCAATCTTGAAAATAAGCGAGTTGATCTTTTTGAGGGCCCTAACGAAGGGTTGGGGGAAGAAAACGTCTTGTTAGCATCCTCCATGACAAATCAGCAGCTTGTTGATCATGGAAACAGAATGATGGATGAAAGTGATCAAACCATTGAAAGAGGAAAGAAGATTGTACAAGAAACAATCAATGTTGGAACAGAAACTGCAGCAGCACTTAAGGCCCAGACTGAACAAATGAGCAGGGTTGTCAATGAGTTGGACTCCATCCATTTCTCAATAAAAAAAGCTTCCAAGCTGGTTAAGGAAATCGGTCGGCAGGTTGCTACTGATCGATGTATTATGGCCTTGCTCTTCCTTATCGTGATTGGGGTCATTGCCATCATTATTGTGAAGCTTGTTCATCCAAACAACAAAGATATCAGGGATATTCCCGGATTAGCACCACCAGCTCAATCGCGGAGATTGCTTTCATATCCACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_5952.p1 GENE.R_Transcript_5952~~R_Transcript_5952.p1 ORF type:complete len:262 (+),score=57.24,Sec20|PF03908.9|16,Sec20|PF03908.9|1.8e-07,V-SNARE_C|PF12352.4|6.7e+02,V-SNARE_C|PF12352.4|6.3e-06 R_Transcript_5952:404-1189(+)
MSSLSTISEELGELDGQISDVFRALSNGFQKLEKIKDPSRQSRQLEELTDKMRDCKRLIKDFDREVKAMEGRNDANTNKMLSEKKQSMVKELNSYVALKKQYATNLENKRVDLFEGPNEGLGEENVLLASSMTNQQLVDHGNRMMDESDQTIERGKKIVQETINVGTETAAALKAQTEQMSRVVNELDSIHFSIKKASKLVKEIGRQVATDRCIMALLFLIVIGVIAIIIVKLVHPNNKDIRDIPGLAPPAQSRRLLSYPH*

Click here to download the sequence:
Link to NCBI Protein BLAST